Evidence map›Paper›PMID 30275344›Full record

ArticleMolecular and cellular biology2018

Mediator Is Essential for Small Nuclear and Nucleolar RNA Transcription in Yeast.

Jason P Tourigny, Moustafa M Saleh, Kenny Schumacher, Didier Devys, Gabriel E Zentner

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Jason P TourignyDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Moustafa M SalehDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Kenny SchumacherInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.
Didier DevysInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.
Gabriel E ZentnerDepartment of Biology, Indiana University, Bloomington, Indiana, USA gzentner@indiana.edu.ORCID 0000-0002-0801-7646
Centre National de la Recherche Scientifique · FRIndiana University Bloomington · USIndiana University Health · US

Funding

Regulation of transcription by the Mediator complexR35GM128631 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI ZENTNER, GABRIEL · 2018 to 2020
$1.2M
NIGMS NIH HHS R35 GM128631
6 · The paper itself

Abstract

Eukaryotic RNA polymerase II (RNAPII) transcribes mRNA genes and non-protein-coding RNA (ncRNA) genes, including those encoding small nuclear and nucleolar RNAs (sn/snoRNAs). In metazoans, RNAPII transcription of sn/snoRNAs is facilitated by a number of specialized complexes, but no such complexes have been discovered in yeast. It has been proposed that yeast sn/snoRNA and mRNA expression relies on a set of common factors, but the extent to which regulators of mRNA genes function at yeast sn/snoRNA genes is unclear. Here, we investigated a potential role for the Mediator complex, essential for mRNA gene transcription, in sn/snoRNA gene transcription. We found that Mediator maps to sn/snoRNA gene regulatory regions and that rapid depletion of the essential structural subunit Med14 strongly reduces RNAPII and TFIIB occupancy as well as nascent transcription of sn/snoRNA genes. Deletion of Med3 and Med15, subunits of the activator-interacting Mediator tail module, does not affect Mediator recruitment to or RNAPII and TFIIB occupancy of sn/snoRNA genes. Our analyses suggest that Mediator promotes PIC formation and transcription at sn/snoRNA genes, expanding the role of this critical regulator beyond its known functions in mRNA gene transcription and demonstrating further mechanistic similarity between the transcription of mRNA and sn/snoRNA genes.

Indexed as

Cell NucleolusNuclear ProteinsRegulatory Sequences, Nucleic AcidRNA, MessengerRNA Polymerase IIRNA, Small NuclearRNA, Small NucleolarRNA, UntranslatedSaccharomyces cerevisiaeTranscription, GeneticNuclear ProteinsRNA, MessengerRNA Polymerase IIRNA, Small NuclearRNA, Small NucleolarRNA, UntranslatedMediatorRNA polymerase IIsnoRNAsnRNA

Identifiers

PMID30275344
PMCPMC6275182
OpenAlexW2951644150

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.