Evidence map›Paper›PMID 30273395›Full record

ArticlePloS one2018

Loss of murine Paneth cell function alters the immature intestinal microbiome and mimics changes seen in neonatal necrotizing enterocolitis.

Shiloh R Lueschow, Jessica Stumphy, Huiyu Gong, Stacy L Kern, Timothy G Elgin, Mark A Underwood, Karen M Kalanetra, David A Mills, Melissa H Wong, David K Meyerholz and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 72 citations in OpenAlex.

  1. Review
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  4. Article
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  10. Article
  11. Paneth cell ontogeny in term and preterm ovine models.Frontiers in veterinary science · 2024
    Article
  12. Review
  13. Article
  14. Review
  15. Paneth cells in farm animals: current status and future direction.Journal of animal science and biotechnology · 2023
    Review
  16. Review
  17. Review
  18. Models of necrotizing enterocolitis.Seminars in perinatology · 2023
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Shiloh R LueschowDepartment of Microbiology and Immunology, University of Iowa, Iowa City, Iowa, United States of America.
Jessica StumphyStead Family Department of Pediatrics, University of Iowa, Iowa City, Iowa, United States of America.
Huiyu GongStead Family Department of Pediatrics, University of Iowa, Iowa City, Iowa, United States of America.
Stacy L KernStead Family Department of Pediatrics, University of Iowa, Iowa City, Iowa, United States of America.
Timothy G ElginStead Family Department of Pediatrics, University of Iowa, Iowa City, Iowa, United States of America.
Mark A UnderwoodDepartments of Pediatrics and Food Science and Technology, University of California Davis, Sacramento, California, United States of America.
Karen M KalanetraDepartments of Pediatrics and Food Science and Technology, University of California Davis, Sacramento, California, United States of America.
David A MillsDepartments of Pediatrics and Food Science and Technology, University of California Davis, Sacramento, California, United States of America.
Melissa H WongDepartment of Cell, Developmental, and Cancer Biology, Oregon Health & Science University, Portland, Oregon, United States of America.
David K MeyerholzDepartment of Pathology, University of Iowa, Iowa City, Iowa, United States of America.
Misty GoodDepartment of Pediatrics, Washington University School of Medicine, St Louis, Missouri, United States of America.
Steven J McElroyDepartment of Microbiology and Immunology, University of Iowa, Iowa City, Iowa, United States of America.ORCID 0000-0002-4321-723X
University of Iowa · USUniversity of California, Davis · USOregon Health & Science University · USWashington University in St. Louis · US

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI TIMOTHY J. EBERLEIN · 2001 to 2026
$128.0M
WU INSTITUTE OF CLINICAL AND TRANSLATIONAL SCIENCESUL1TR002345 · NCATS · WASHINGTON UNIVERSITY · PI William G. Powderly · 2017 to 2026
$97.8M
Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI STANLEY R. HAMILTON · 1985 to 2026
$86.3M
Washington University Institute of Clinical and Translational SciencesUL1TR000448 · NCATS · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2012 to 2016
$41.4M
Activation of probiotic bifidobacteria by milk glyansR01AT008759 · NCCIH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI GERMAN, BRUCE, LEBRILLA, CARLITO B · 2014 to 2018
$4.2M
Mechanism of Activation of Probiotic Bifidobacteria by Prebiotic Milk GlycansR01AT007079 · NCCIH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI GERMAN, BRUCE, LEBRILLA, CARLITO B · 2012 to 2016
$2.2M
Characterization of intestinal stem cells (research project)U01DK085525 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI WONG, MELISSA H. · 2009 to 2014
$2.0M
Mechanisms of Gastrointestinal Epithelial Cell Injury & Repair During DevelopmentK08DK083677 · NIDDK · VANDERBILT UNIVERSITY · PI MCELROY, STEVEN JAMES · 2009 to 2013
$723k
Novel Anti-Inflammatory Properties of Breast Milk in Necrotizing EnterocolitisK08DK101608 · NIDDK · WASHINGTON UNIVERSITY · PI GOOD, MISTY L · 2014 to 2017
$584k
Aryl hydrocarbon receptor signaling in the pathogenesis of necrotizing enterocolitisR03DK111473 · NIDDK · WASHINGTON UNIVERSITY · PI GOOD, MISTY L · 2017 to 2018
$153k
Role of Paneth Cells in Development of Necrotizing EnterocolitisR03DK097335 · NIDDK · UNIVERSITY OF IOWA · PI MCELROY, STEVEN JAMES · 2013 to 2014
$151k
NCATS NIH HHS UL1 TR000448NCCIH NIH HHS R01 AT007079NCCIH NIH HHS R01 AT008759NCI NIH HHS P30 CA091842NIDDK NIH HHS K08 DK083677NIDDK NIH HHS K08 DK101608NIDDK NIH HHS R03 DK097335NIDDK NIH HHS R03 DK111473NIDDK NIH HHS U01 DK085525
6 · The paper itself

Abstract

Necrotizing enterocolitis (NEC) remains the leading cause of gastrointestinal morbidity and mortality in premature infants. Human and animal studies suggest a role for Paneth cells in NEC pathogenesis. Paneth cells play critical roles in host-microbial interactions and epithelial homeostasis. The ramifications of eliminating Paneth cell function on the immature host-microbial axis remains incomplete. Paneth cell function was depleted in the immature murine intestine using chemical and genetic models, which resulted in intestinal injury consistent with NEC. Paneth cell depletion was confirmed using histology, electron microscopy, flow cytometry, and real time RT-PCR. Cecal samples were analyzed at various time points to determine the effects of Paneth cell depletion with and without Klebsiella gavage on the microbiome. Deficient Paneth cell function induced significant compositional changes in the cecal microbiome with a significant increase in Enterobacteriacae species. Further, the bloom of Enterobacteriaceae species that occurs is phenotypically similar to what is seen in human NEC. This further strengthens our understanding of the importance of Paneth cells to intestinal homeostasis in the immature intestine.

Indexed as

Gastrointestinal MicrobiomeAnimalsAnimals, NewbornAutophagosomesCecumCytokinesDiphtheria ToxinDisease Models, AnimalDithizoneEnterobacteriaceaeEnterocolitis, NecrotizingKlebsiella pneumoniaeMiceMice, Inbred C57BLMuramidasePaneth CellsCytokinesDiphtheria ToxinDithizoneMuramidase

Identifiers

PMID30273395
PMCPMC6166990
OpenAlexW2895280560

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.