Evidence map›Paper›PMID 30273362›Full record

ArticlePloS one2018

Isothermal amplification and rapid detection of Klebsiella pneumoniae based on the multiple cross displacement amplification (MCDA) and gold nanoparticle lateral flow biosensor (LFB).

Lina Niu, Fan Zhao, Jinlong Chen, Jinqing Nong, Chunmei Wang, Jing Wang, Naishu Gao, Xiaoxue Zhu, Lei Wu, Shoukui Hu

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Lina NiuDepartment of Pathogen Biology, School of Basic Medicine and Lifescience, Hainan Medical University, Haikou, Hainan, China.
Fan ZhaoDepartment of Clinical Laboratory, Peking University Shougang Hospital, Beijing, China.
Jinlong ChenDepartment of Pathogen Biology, School of Basic Medicine and Lifescience, Hainan Medical University, Haikou, Hainan, China.
Jinqing NongDepartment of Clinical Laboratory, Peking University Shougang Hospital, Beijing, China.
Chunmei WangDepartment of Clinical Laboratory, Peking University Shougang Hospital, Beijing, China.
Jing WangDepartment of Clinical Laboratory, Peking University Shougang Hospital, Beijing, China.
Naishu GaoDepartment of Clinical Laboratory, Peking University Shougang Hospital, Beijing, China.
Xiaoxue ZhuDepartment of Clinical Laboratory, Peking University Shougang Hospital, Beijing, China.
Lei WuDepartment of Clinical Laboratory, Peking University Shougang Hospital, Beijing, China.
Shoukui HuDepartment of Clinical Laboratory, Peking University Shougang Hospital, Beijing, China.ORCID 0000-0001-6339-3954

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Klebsiella pneumoniae (K. pneumoniae) is a frequent pathogen causing nosocomial infections and outbreaks. We developed a multiple cross displacement amplification (MCDA) assay for the detection of K. pneumoniae, which can get the positive results within 40 minutes' isothermal amplification. Gold-nanoparticle lateral flow biosensor (LFB) and colorimetric indicators were used for the rapid readouts of MCDA amplification. The detection limit of this assay was 100 fg per reaction at 65°C, which was confirmed to be the optimal amplification temperature according to the real time turbidimeters. For specificity, all of the 30 clinical-source K. pneumoniae strains were positive for the MCDA, and all of the non-K. pneumoniae strains belonging to 31 different species were negative for this MCDA assay. To evaluate the practical applicability of this method, we assessed its detection limit for K. pneumoniae strains in sputum samples (24 CFU per reaction), and DNA templates of 100 sputum samples further underwent the MCDA-LFB tests. All of the sputum samples being positive for K. pneumoniae (30/100) with the culture method were successfully identified with the MCDA assay, the detection power of which was higher than that of polymerase chain reaction (PCR) (25/100). Thus, the MCDA test for K. pneumoniae combined with the gold nanoparticle LFB as the results readout scheme, are simple, specific, and sensitive methods for the rapid diagnosis of K. pneumoniae in clinical samples.

Indexed as

TemperatureBiosensing TechniquesGoldHumansKlebsiella pneumoniaeLimit of DetectionMetal NanoparticlesNucleic Acid Amplification TechniquesTime FactorsGold

Identifiers

PMID30273362
PMCPMC6166938

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.