Evidence map›Paper›PMID 30272815›Full record

ArticleJournal of cellular biochemistry2019

Identification of Phf16 and Pnpla3 as new adipogenic factors regulated by phytochemicals.

Seo-Hyuk Chang, Ui Jeong Yun, Jin Hee Choi, Suji Kim, A Reum Lee, Dong Ho Lee, Min-Ju Seo, Vanja Panic, Claudio J Villanueva, No-Joon Song and 1 more

Abstract read
In one paragraph

Article in Journal of cellular biochemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Hexane Extract ofLife (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Seo-Hyuk ChangDepartment of Food Science and Biotechnology, Sungkyunkwan University, Suwon, Korea.
Ui Jeong YunDepartment of Food Science and Biotechnology, Sungkyunkwan University, Suwon, Korea.
Jin Hee ChoiDepartment of Food Science and Biotechnology, Sungkyunkwan University, Suwon, Korea.
Suji KimDepartment of Food Science and Biotechnology, Sungkyunkwan University, Suwon, Korea.
A Reum LeeDepartment of Food Science and Biotechnology, Sungkyunkwan University, Suwon, Korea.
Dong Ho LeeDepartment of Food Science and Biotechnology, Sungkyunkwan University, Suwon, Korea.
Min-Ju SeoDepartment of Food Science and Biotechnology, Sungkyunkwan University, Suwon, Korea.
Vanja PanicDepartment of Biochemistry, School of Medicine, University of Utah, Salt Lake City, Utah.
Claudio J VillanuevaDepartment of Biochemistry, School of Medicine, University of Utah, Salt Lake City, Utah.
No-Joon SongDepartment of Food Science and Biotechnology, Sungkyunkwan University, Suwon, Korea.
Kye Won ParkDepartment of Food Science and Biotechnology, Sungkyunkwan University, Suwon, Korea.ORCID 0000-0003-2771-249X
Sungkyunkwan University · KRUniversity of Utah · US

Funding

Role of TLE3 in the transcriptional regulation of beige adipocytesR01DK103930 · NIDDK · UNIVERSITY OF UTAH · PI VILLANUEVA, CLAUDIO J · 2015 to 2019
$1.7M
NIDDK NIH HHS R01 DK103930
6 · The paper itself

Abstract

Adipocyte differentiation is controlled by multiple signaling pathways. To identify new adipogenic factors, C3H10T1/2 adipocytes were treated with previously known antiadipogenic phytochemicals (resveratrol, butein, sulfuretin, and fisetin) for 24 hours. Commonly regulated genes were then identified by transcriptional profiling analysis. Three genes (chemokine (C-X-C motif) ligand 1 [ Cxcl1], heme oxygenase 1 [ Hmox1], and PHD (plant homeo domain) finger protein 16 [ Phf16]) were upregulated while two genes (G0/G1 switch gene 2 [ G0s2] and patatin-like phospholipase domain containing 3 [ Pnpla3]) were downregulated by these four antiadipogenic compounds. Tissue expression profiles showed that the G0s2 and Pnpla3 expressions were highly specific to adipose depots while the other three induced genes were ubiquitously expressed with significantly higher expression in adipose tissues. While Cxcl1 expression was decreased, expressions of the other four genes were significantly increased during adipogenic differentiation of C3H10T1/2 cells. Small interfering RNA-mediated knockdown including Phf16 and Pnpla3 indicated that these genes might play regulatory roles in lipid accumulation and adipocyte differentiation. Specifically, the silencing of two newly identified adipogenic genes, Phf16 or Pnpla3, suppressed lipid accumulation and expression of adipocyte markers in both 3T3-L1 and C3H10T1/2 cells. Taken together, these data showed previously uncovered roles of Phf16 and Pnpla3 in adipogenesis, highlighting the potential of using phytochemicals for further investigation of adipocyte biology.

Indexed as

3T3-L1 CellsAcyltransferasesAdipogenesisAnimalsCell DifferentiationChemokine CXCL1Gene Expression RegulationMiceOncogene ProteinsPhospholipases A2, Calcium-IndependentPhytochemicalsAcyltransferasesChemokine CXCL1Cxcl1 protein, mouseOncogene ProteinsPhospholipases A2, Calcium-IndependentPhytochemicalsPNPLA3 protein, mouseadipocyteadipocyte differentiationpatatin-like phospholipase domain containing 3PHD (plant homeo domain) finger protein 16phytochemical

Identifiers

PMID30272815
PMCPMC6688606
OpenAlexW2891834985

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.