Evidence map›Paper›PMID 30272509›Full record

ArticleNucleus (Austin, Tex.)2018

The karyosphere capsule in Rana temporaria oocytes contains structural and DNA-binding proteins.

Nadya Ilicheva, Olga Podgornaya, Dmitry Bogolyubov, Galina Pochukalina

Open access · goldAbstract read
In one paragraph

Article in Nucleus (Austin, Tex.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Nadya Ilichevaa Laboratory of Cell Morphology , Institute of Cytology of the Russian Academy of Sciences , St. Petersburg , Russia.ORCID 0000-0001-9594-7202
Olga Podgornayaa Laboratory of Cell Morphology , Institute of Cytology of the Russian Academy of Sciences , St. Petersburg , Russia.
Dmitry Bogolyubova Laboratory of Cell Morphology , Institute of Cytology of the Russian Academy of Sciences , St. Petersburg , Russia.
Galina Pochukalinaa Laboratory of Cell Morphology , Institute of Cytology of the Russian Academy of Sciences , St. Petersburg , Russia.
Institute of Cytology · RUSt Petersburg University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During the last stages of oogenesis, oocyte chromosomes condense and come close together, forming the so-called karyosphere. Karyosphere formation is accompanied by an essential decrease in transcriptional activity. In the grass frog Rana temporaria, the karyosphere is surrounded by an extrachromosomal capsule that separates the chromosomes from the rest of the nucleoplasm. The karyosphere capsule (KC) of R. temporaria has been investigated in detail at the ultrastructural level, but its protein composition remained largely unknown. We demonstrate here that nuclear actin, especially F-actin, as well as lamins A/C and B are the most abundant proteins of the KC. Key proteins of nuclear pore complexes, such as Nup93 and Nup35, are also detectable in the KC. New antibodies recognizing the telomere-binding protein TRF2 allowed us to localize TRF2 in nuclear speckles. We also found that the R. temporaria KC contains some proteins involved in chromatin remodeling, including topoisomerase II and ATRX. Thus, we believe that KC isolates the chromosomes from the rest of the nucleoplasm during the final period of oocyte growth (late diplotene) and represents a specialized oocyte nuclear compartment to store a variety of factors involved in nuclear metabolism that can be used in future early development. Abbreviations: BrUTP: 5-bromouridine 5'-triphosphate; CytD: cytochalasin D; IGCs: interchromatin granule clasters; IgG: immunoglobulin G; KC: karyosphere capsule; Mw: molecular weight; NE: nuclear envelope; PBS: phosphate buffered saline; SDS-PAGE: sodium dodecyl sulfate polyacrylamide gel electrophoresis; Topo II: topoisomerase II.

Indexed as

Rana temporariaAnimalsCell NucleusDNA-Binding ProteinsFemaleOocytesProtein ConformationDNA-Binding ProteinsATRXKaryospherekaryosphere capsulelaminsnuclear actinnucleoporinsoogenesisRana temporariatopoisomerase IItranscription

Identifiers

PMID30272509
PMCPMC6244735
OpenAlexW2894965163

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.