Evidence map›Paper›PMID 30271921›Full record

ArticleCommunications biology2018

Ecology determines how low antibiotic concentration impacts community composition and horizontal transfer of resistance genes.

Johannes Cairns, Lasse Ruokolainen, Jenni Hultman, Manu Tamminen, Marko Virta, Teppo Hiltunen

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 102 citations in OpenAlex.

  1. Article
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  14. Review
  15. Article
  16. Antimicrobial resistance level and conjugation permissiveness shape plasmid distribution in clinical enterobacteria.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  17. Antibiotic perturbations to the gut microbiome.Nature reviews. Microbiology · 2023
    Review
  18. Article
  19. Article
  20. Resistome Study in Aquatic Environments.Journal of microbiology and biotechnology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Johannes CairnsDepartment of Microbiology, University of Helsinki, P.O. Box 56, 00014, Helsinki, Finland.ORCID http://orcid.org/0000-0003-1329-2025
Lasse RuokolainenDepartment of Biosciences, University of Helsinki, P.O. Box 65, 00014, Helsinki, Finland.ORCID http://orcid.org/0000-0003-0951-9100
Jenni HultmanDepartment of Microbiology, University of Helsinki, P.O. Box 56, 00014, Helsinki, Finland.ORCID http://orcid.org/0000-0002-3431-1785
Manu TamminenDepartment of Aquatic Ecology, Eawag, Dubendorf, 8600, Zurich, Switzerland.
Marko VirtaDepartment of Microbiology, University of Helsinki, P.O. Box 56, 00014, Helsinki, Finland.ORCID http://orcid.org/0000-0001-5981-7566
Teppo HiltunenDepartment of Microbiology, University of Helsinki, P.O. Box 56, 00014, Helsinki, Finland. teppo.hiltunen@helsinki.fi.ORCID http://orcid.org/0000-0001-7206-2399
University of Helsinki · FIETH Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Low concentrations of antibiotics have numerous effects on bacteria. However, it is unknown whether ecological factors such as trophic interactions and spatial structuring influence the effects of low concentrations of antibiotics on multispecies microbial communities. Here, we address this question by investigating the effects of low antibiotic concentration on community composition and horizontal transfer of an antibiotic resistance plasmid in a 62-strain bacterial community in response to manipulation of the spatial environment and presence of predation. The strong effects of antibiotic treatment on community composition depend on the presence of predation and spatial structuring that have strong community effects on their own. Overall, we find plasmid transfer to diverse recipient taxa. Plasmid transfer is likely to occur to abundant strains, occurs to a higher number of strains in the presence of antibiotic, and also occurs to low-abundance strains in the presence of spatial structures. These results fill knowledge gaps concerning the effects of low antibiotic concentrations in complex ecological settings.

Identifiers

PMID30271921
PMCPMC6123812
OpenAlexW2801656496

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.