Evidence map›Paper›PMID 30269289›Full record

ArticleOrigins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life2018

Trimetaphosphate Activates Prebiotic Peptide Synthesis across a Wide Range of Temperature and pH.

Izabela Sibilska, Yu Feng, Lingjun Li, John Yin

Open access · greenAbstract read
In one paragraph

Article in Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
  6. Toward Molecular Cooperation by De Novo Peptides.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 2021
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Izabela SibilskaWisconsin Institute for Discovery, University of Wisconsin-Madison, 330 N. Orchard Street, Madison, WI, 53715, USA.
Yu FengSchool of Pharmacy, University of Wisconsin-Madison, 777 Highland Avenue, Madison, WI, 53705, USA.
Lingjun LiSchool of Pharmacy, University of Wisconsin-Madison, 777 Highland Avenue, Madison, WI, 53705, USA.
John YinWisconsin Institute for Discovery, University of Wisconsin-Madison, 330 N. Orchard Street, Madison, WI, 53715, USA. john.yin@wisc.edu.ORCID http://orcid.org/0000-0001-6146-0594
University of Wisconsin–Madison · US

Funding

Wisconsin Infant Study Cohort (WISC)U19AI104317 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI James E. Gern · 2013 to 2026
$22.5M
Mass Spectrometric Studies of Neuropeptides in FeedingR01DK071801 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI LINGJUN LI · 2006 to 2026
$6.7M
Acquisition of a High-Field Dual Source FTICR-MS for Pharmaceutical ResearchS10RR029531 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI LI, LINGJUN · 2011 to 2011
$2.1M
Evolution of Virus-Host InteractionsR01AI091646 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI YIN, JOHN · 2011 to 2015
$2.0M
National Institute of Allergy and Infectious Diseases R01AI091646National Institute of Allergy and Infectious Diseases U19AI0104317NCRR NIH HHS S10 RR029531NCRR NIH HHS S10RR029531NIAID NIH HHS R01 AI091646NIAID NIH HHS U19 AI104317NIDDK NIH HHS R01 DK071801NIDDK NIH HHS R01DK071801School of Medicine and Public Health, University of Wisconsin-Madison Janis Apinis ProfessorshipUniversity of Wisconsin Madison Vilas Distinguished Achievement ProfessorshipUniversity of Wisconsin-Madison (US) Vilas Distinguished Achievement ProfessorshipWisconsin Alumni Research Foundation (US) Accelerator Fund grantWisconsin Alumni Research Foundation (US) Robert Draper Technology Innovation FundWisconsin Alumni Research Foundation (US) shared instrument grant
6 · The paper itself

Abstract

The biochemical activation of amino acids by adenosine triphosphate (ATP) drives the synthesis of proteins that are essential for all life. On the early Earth, before the emergence of cellular life, the chemical condensation of amino acids to form prebiotic peptides or proteins may have been activated by inorganic polyphosphates, such as tri metaphosphate (TP). Plausible volcanic and other potential sources of TP are known, and TP readily activates amino acids for peptide synthesis. But de novo peptide synthesis also depends on pH, temperature, and processes of solvent drying, which together define a varied range of potential activating conditions. Although we cannot replay the tape of life on Earth, we can examine how activator, temperature, acidity and other conditions may have collectively shaped its prebiotic evolution. Here, reactions of two simple amino acids, glycine and alanine, were tested, with or without TP, over a wide range of temperature (0-100 °C) and acidity (pH 1-12), while open to the atmosphere. After 24 h, products were analyzed by HPLC and mass spectrometry. In the absence of TP, glycine and alanine readily formed peptides under harsh near-boiling temperatures, extremes of pH, and within dry solid residues. In the presence of TP, however, peptides arose over a much wider range of conditions, including ambient temperature, neutral pH, and in water. These results show how polyphosphates such as TP may have enabled the transition of peptide synthesis from harsh to mild early Earth environments, setting the stage for the emergence of more complex prebiotic chemistries.

Indexed as

Origin of LifePrebioticsAdenosine TriphosphatePeptide BiosynthesisPolyphosphatesAdenosine TriphosphatePolyphosphatesPrebioticstrimetaphosphoric acidAlaninede novo peptidesDrying-induced condensationGlycinePrebioticTrimetaphosphate

Identifiers

PMID30269289
PMCPMC8092023
OpenAlexW2893013086

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.