Evidence map›Paper›PMID 30268787›Full record

ReviewGastroenterology2019

Insights From Deep Sequencing of the HBV Genome-Unique, Tiny, and Misunderstood.

Anna L McNaughton, Valentina D'Arienzo, M Azim Ansari, Sheila F Lumley, Margaret Littlejohn, Peter Revill, Jane A McKeating, Philippa C Matthews

Open access · hybridAbstract readReview
In one paragraph

Review in Gastroenterology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed, 1 pooled it
10.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 1 synthesis or guideline pooled it, 125 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Guidelines for the Prevention and Treatment of Chronic Hepatitis B (version 2022).Journal of clinical and translational hepatology · 2023
    Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Anna L McNaughtonNuffield Department of Medicine, Peter Medawar Building for Pathogen Research, Oxford, United Kingdom.
Valentina D'ArienzoNuffield Department of Medicine, NDM Research Building, Oxford, United Kingdom.
M Azim AnsariNuffield Department of Medicine, Peter Medawar Building for Pathogen Research, Oxford, United Kingdom.
Sheila F LumleyNuffield Department of Medicine, Peter Medawar Building for Pathogen Research, Oxford, United Kingdom; Department of Infectious Diseases and Microbiology, Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Oxford, United Kingdom.
Margaret LittlejohnVictorian Infectious Diseases Reference Laboratory, Royal Melbourne Hospital at the Peter Doherty Institute of Infection and Immunity, Melbourne, Australia; Department of Microbiology and Immunology, University of Melbourne. Melbourne, Australia.
Peter RevillVictorian Infectious Diseases Reference Laboratory, Royal Melbourne Hospital at the Peter Doherty Institute of Infection and Immunity, Melbourne, Australia; Department of Microbiology and Immunology, University of Melbourne. Melbourne, Australia.
Jane A McKeatingNuffield Department of Medicine, NDM Research Building, Oxford, United Kingdom.
Philippa C MatthewsNuffield Department of Medicine, Peter Medawar Building for Pathogen Research, Oxford, United Kingdom; Department of Infectious Diseases and Microbiology, Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Oxford, United Kingdom. Electronic address: philippa.matthews@ndm.ox.ac.uk.
John Radcliffe Hospital · GBMedawar Building for Pathogen Research · GBNuffield Orthopaedic Centre · GBThe Royal Melbourne Hospital · AU

Funding

Medical Research Council G0400802Medical Research Council G0801976Medical Research Council G1100247Medical Research Council MC_PC_16056Medical Research Council MR/K01532X/1Wellcome TrustWellcome Trust 110110Wellcome Trust IA 200838/Z/16/Z
6 · The paper itself

Abstract

Hepatitis B virus (HBV) is a unique, tiny, partially double-stranded, reverse-transcribing DNA virus with proteins encoded by multiple overlapping reading frames. The substitution rate is surprisingly high for a DNA virus, but lower than that of other reverse transcribing organisms. More than 260 million people worldwide have chronic HBV infection, which causes 0.8 million deaths a year. Because of the high burden of disease, international health agencies have set the goal of eliminating HBV infection by 2030. Nonetheless, the intriguing HBV genome has not been well characterized. We summarize data on the HBV genome structure and replication cycle, explain and quantify diversity within and among infected individuals, and discuss advances that can be offered by application of next-generation sequencing technology. In-depth HBV genome analyses could increase our understanding of disease pathogenesis and allow us to better predict patient outcomes, optimize treatment, and develop new therapeutics.

Indexed as

Genome, ViralHepatitis BHepatitis B virusHigh-Throughput Nucleotide SequencingHumansVirus ReplicationDiversityEvolutionGenotypeHepatitis B Virus

Identifiers

PMID30268787
PMCPMC6347571
OpenAlexW2892432796

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.