Evidence map›Paper›PMID 30267725›Full record

ArticleJournal of virological methods2018

A novel multiplex PCR for virus detection by melting curve analysis.

Pengcheng Liu, Lijuan Lu, Menghua Xu, Huaqing Zhong, Ran Jia, Liyun Su, Lingfeng Cao, Zuoquan Dong, Niuniu Dong, Linfu Zhou and 1 more

Abstract read
In one paragraph

Article in Journal of virological methods, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Pengcheng LiuDepartment of Clinical Laboratory, Children's Hospital of Fudan University, Shanghai, China.
Lijuan LuDepartment of Clinical Laboratory, Children's Hospital of Fudan University, Shanghai, China.
Menghua XuDepartment of Clinical Laboratory, Children's Hospital of Fudan University, Shanghai, China.
Huaqing ZhongDepartment of Clinical Laboratory, Children's Hospital of Fudan University, Shanghai, China.
Ran JiaDepartment of Clinical Laboratory, Children's Hospital of Fudan University, Shanghai, China.
Liyun SuDepartment of Clinical Laboratory, Children's Hospital of Fudan University, Shanghai, China.
Lingfeng CaoDepartment of Clinical Laboratory, Children's Hospital of Fudan University, Shanghai, China.
Zuoquan DongDepartment of Clinical Laboratory, Children's Hospital of Fudan University, Shanghai, China.
Niuniu DongDepartment of Clinical Laboratory, Children's Hospital of Fudan University, Shanghai, China.
Linfu ZhouMedical Biotechnology Laboratory, Zhejiang University, Hangzhou, China. Electronic address: 239zlf@zju.edu.cn.
Jin XuDepartment of Clinical Laboratory, Children's Hospital of Fudan University, Shanghai, China. Electronic address: jinxu_125@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRapid and accurate laboratory diagnoses of viral infections are crucial for the management and treatment of patients with viral infections. Conventional methods for virus detection are labourious, time consuming, and only a single virus can be analysed in one assay.

objectivesThe objective of this study was to develop a novel real-time PCR method for multiple virus detection by melting curve analysis using Taqman probes in a single reaction. STUDY

designAs a model, six respiratory viruses were detected in one tube using three fluorophores. The specificity was assessed by cross-reaction tests with other common respiratory pathogens. The analytical sensitivity was assessed by testing the limit of detection of the assay using artificial plasmids as the positive template. The clinical evaluation of the established assay was evaluated for the detection of respiratory viruses in clinical samples, and the results were compared with direct fluorescent antibody testing (DFA).

resultsThe six respiratory viruses were clearly distinguished by their respective melting temperature values in the corresponding fluorescence detection channels. No cross reactions were observed by cross reaction tests. The detection limits of this assay were 2 to 2 × 10

conclusionsTaqman probe-based melting curve analysis is well suited for detection of multiple viruses in clinical and research laboratories because of its high throughput, reliability, and cost savings.

Indexed as

Transition TemperatureCross ReactionsFluorescent Antibody Technique, DirectFluorescent DyesHumansLimit of DetectionMultiplex Polymerase Chain ReactionReproducibility of ResultsRespiratory Tract InfectionsSensitivity and SpecificityVirusesFluorescent DyesDetectionMelting curveMultiplex PCRTaqMan probeVirus

Identifiers

PMID30267725
PMCPMC7113878

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.