Evidence map›Paper›PMID 30267710›Full record

ArticleGastroenterology2019

Hdac1 Regulates Differentiation of Bipotent Liver Progenitor Cells During Regeneration via Sox9b and Cdk8.

Sungjin Ko, Jacquelyn O Russell, Jianmin Tian, Ce Gao, Makoto Kobayashi, Rilu Feng, Xiaodong Yuan, Chen Shao, Huiguo Ding, Minakshi Poddar and 5 more

Abstract read
In one paragraph

Article in Gastroenterology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 86 citations in OpenAlex.

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  15. Using different zebrafish models to explore liver regeneration.Frontiers in cell and developmental biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 4 countries.

Sungjin KoDepartment of Developmental Biology, McGowan Institute for Regenerative Medicine, Pittsburgh, Pennsylvania; Department of Pathology, Pittsburgh, Pennsylvania. Electronic address: sungjin@pitt.edu.
Jacquelyn O RussellDepartment of Pathology, Pittsburgh, Pennsylvania.
Jianmin TianDepartment of Pathology, Pittsburgh, Pennsylvania; Pittsburgh Liver Research Center, Pittsburgh, Pennsylvania.
Ce GaoMinistry of Education Key Laboratory for Molecular Animal Nutrition, College of Animal Sciences, Zhejiang University, Hangzhou, China.
Makoto KobayashiDepartment of Molecular and Developmental Biology, Faculty of Medicine, University of Tsukuba, Tsukuba, Japan.
Rilu FengDepartment of Medicine II, Section Molecular Hepatology, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany.
Xiaodong YuanDepartment of Medicine II, Section Molecular Hepatology, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany.
Chen ShaoDepartment of Pathology, Beijing You'an Hospital, Capital Medical University, Beijing, China.
Huiguo DingDepartment of Gastroenterology and Hepatology, Beijing You'an Hospital, Capital Medical University, Beijing, China.
Minakshi PoddarDepartment of Pathology, Pittsburgh, Pennsylvania.
Sucha SinghDepartment of Pathology, Pittsburgh, Pennsylvania.
Joseph LockerDepartment of Pathology, Pittsburgh, Pennsylvania; Pittsburgh Liver Research Center, Pittsburgh, Pennsylvania.
Hong-Lei WengDepartment of Medicine II, Section Molecular Hepatology, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany.
Satdarshan P MongaDepartment of Pathology, Pittsburgh, Pennsylvania; Pittsburgh Liver Research Center, Pittsburgh, Pennsylvania; Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania.
Donghun ShinDepartment of Developmental Biology, McGowan Institute for Regenerative Medicine, Pittsburgh, Pennsylvania; Pittsburgh Liver Research Center, Pittsburgh, Pennsylvania. Electronic address: donghuns@pitt.edu.
University of Pittsburgh · USHeidelberg University · DECapital Medical University · CNMcGowan Institute for Regenerative Medicine · USUniversity of Tsukuba · JPZhejiang University · CN

Funding

Role of Wnt/Beta-Catenin Signaling in Liver DevelopmentR01DK062277 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Satdarshan Singh Monga · 2004 to 2026
$9.0M
Cellular Approaches to Tissue Engineering/RegenerationT32EB001026 · NIBIB · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DUNCAN, ANDREW W, MONGA, SATDARSHAN SINGH · 2003 to 2024
$5.5M
Elucidating the role of the FXR-PTEN-PI3K-AKT-mTOR axis in liver progenitor cell-driven liver regenerationR01DK101426 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SHIN, DONGHUN · 2014 to 2023
$3.8M
The transcriptional basis of tumor promotionR01CA104292 · NCI · YESHIVA UNIVERSITY · PI LOCKER, JOSEPH D · 2003 to 2013
$3.5M
Yap and beta-catenin interactions in liver: Implications in PathophysiologyR01CA204586 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHEN, XIN, MONGA, SATDARSHAN SINGH · 2016 to 2020
$2.1M
Targeting beta-catenin in liver pathology: Novel Interactions, Novel ParadigmsR01DK100287 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MONGA, SATDARSHAN SINGH · 2013 to 2016
$1.3M
Elucidating the role of β-catenin signaling in liver progenitor cell-mediated liver regenerationF31DK115017 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI RUSSELL, JACQUELYN OLIVIA · 2017 to 2018
$89k
NCI NIH HHS R01 CA104292NCI NIH HHS R01 CA204586NIBIB NIH HHS T32 EB001026NIDDK NIH HHS F31 DK115017NIDDK NIH HHS R01 DK062277NIDDK NIH HHS R01 DK100287NIDDK NIH HHS R01 DK101426
6 · The paper itself

Abstract

BACKGROUND &

aimsUpon liver injury in which hepatocyte proliferation is compromised, liver progenitor cells (LPCs), derived from biliary epithelial cells (BECs), differentiate into hepatocytes. Little is known about the mechanisms of LPC differentiation. We used zebrafish and mouse models of liver injury to study the mechanisms.

methodsWe used transgenic zebrafish, Tg(fabp10a:CFP-NTR), to study the effects of compounds that alter epigenetic factors on BEC-mediated liver regeneration. We analyzed zebrafish with disruptions of the histone deacetylase 1 gene (hdac1) or exposed to MS-275 (an inhibitor of Hdac1, Hdac2, and Hdac3). We also analyzed zebrafish with mutations in sox9b, fbxw7, kdm1a, and notch3. Zebrafish larvae were collected and analyzed by whole-mount immunostaining and in situ hybridization; their liver tissues were collected for quantitative reverse transcription polymerase chain reaction. We studied mice in which hepatocyte-specific deletion of β-catenin (Ctnnb1

resultsLoss of Hdac1 activity in zebrafish blocked differentiation of LPCs into hepatocytes by increasing levels of sox9b mRNA and reduced differentiation of LPCs into BECs by increasing levels of cdk8 mRNA, which encodes a negative regulator gene of Notch signaling. We identified Notch3 as the receptor that regulates differentiation of LPCs into BECs. Loss of activity of Kdm1a, a lysine demethylase that forms repressive complexes with Hdac1, produced the same defects in differentiation of LPCs into hepatocytes and BECs as observed in zebrafish with loss of Hdac1 activity. Administration of MS-275 to mice with hepatocyte-specific loss of β-catenin impaired differentiation of LPCs into hepatocytes after the CDE diet. HDAC1 was expressed in reactive ducts and hepatocyte buds of liver tissues from patients with cirrhosis.

conclusionsHdac1 regulates differentiation of LPCs into hepatocytes via Sox9b and differentiation of LPCs into BECs via Cdk8, Fbxw7, and Notch3 in zebrafish with severe hepatocyte loss. HDAC1 activity was also required for differentiation of LPCs into hepatocytes in mice with liver injury after the CDE diet. These pathways might be manipulated to induce LPC differentiation for treatment of patients with advanced liver diseases.

Indexed as

Cell DifferentiationCell ProliferationLiver RegenerationAcute-On-Chronic Liver FailureAnimalsbeta CateninBile DuctsCholine DeficiencyCyclin-Dependent Kinase 8Disease Models, AnimalF-Box-WD Repeat-Containing Protein 7Gene Expression Regulation, DevelopmentalGene Expression Regulation, EnzymologicHepatocytesHistone Deacetylase 1Humansbeta Catenincdk8 protein, zebrafishCTNNB1 protein, mouseCyclin-Dependent Kinase 8F-Box-WD Repeat-Containing Protein 7Fbxw7 protein, zebrafishHDAC1 protein, humanHDAC1 protein, zebrafishHistone Deacetylase 1Notch3 protein, zebrafishReceptor, Notch3Sox9b protein, zebrafishSOX9 Transcription FactorZebrafish ProteinsCDE DietDevelopmentHepaticSignal Transduction

Identifiers

PMID30267710
PMCPMC6309465
OpenAlexW2893260733

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.