Evidence map›Paper›PMID 30266092›Full record

ArticleGenome biology2018

Ankyrin domain encoding genes from an ancient horizontal transfer are functionally integrated into Nasonia developmental gene regulatory networks.

Daniel Pers, Jeremy A Lynch

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Article in Genome biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

2 authors.

Daniel PersDepartment of Biological Sciences, University of Illinois at Chicago, MBRB 4020, 900 S. Ashland Ave, Chicago, IL, 60607, USA.
Jeremy A LynchDepartment of Biological Sciences, University of Illinois at Chicago, MBRB 4020, 900 S. Ashland Ave, Chicago, IL, 60607, USA. jlynch42@uic.edu.ORCID 0000-0001-7625-657X

Funding

Discovering the basis of the essential function of DNMT1 in wasp embryogenesisR03HD087476 · NICHD · UNIVERSITY OF ILLINOIS AT CHICAGO · PI LYNCH, JEREMY · 2016 to 2017
$157k
"Characterization of the germ plasm of the WASP Nasonic Vitripennis"R03HD078578 · NICHD · UNIVERSITY OF ILLINOIS AT CHICAGO · PI LYNCH, JEREMY · 2013 to 2014
$154k
NICHD NIH HHS R03 HD078578NICHD NIH HHS R03 HD087476NIH HHS 1R03HD078578NIH HHS 1R03HD087476
6 · The paper itself

Abstract

backgroundHow regulatory networks incorporate additional components and how novel genes are functionally integrated into well-established developmental processes are two important and intertwined questions whose answers have major implications for understanding the evolution of development. We recently discovered a set of lineage-restricted genes with strong and specific expression patterns along the dorsal-ventral (DV) axis of the embryo of the wasp Nasonia that may serve as a powerful system for addressing these questions. We sought to both understand the evolutionary history of these genes and to determine their functions in the Nasonia DV patterning system.

resultsWe have found that the novel DV genes are part of a large family of rapidly duplicating and diverging ankyrin domain-encoding genes that originated most likely by horizontal transfer from a prokaryote in a common ancestor of the wasp superfamily Chalcidoidea. We tested the function of those ankyrin-encoding genes expressed along the DV axis and found that they participate in early embryonic DV patterning. We also developed a new wasp model system (Melittobia) and found that some functional integration of ankyrin genes have been preserved for over 90 million years.

conclusionsOur results indicate that regulatory networks can incorporate novel genes that then become necessary for stable and repeatable outputs. Even a modest role in developmental networks may be enough to allow novel or duplicate genes to be maintained in the genome and become fully integrated network components.

Indexed as

Ankyrin RepeatGene Expression Regulation, DevelopmentalGene Regulatory NetworksAnimalsBody PatterningGenes, InsectGene Transfer, HorizontalInsect ProteinsWaspsInsect ProteinsAnkyrinChalcidoideaDevelopmentDorsoventral patterningEmbryoEvoDevoGene duplicationHorizontal gene transferNasoniaRegulatory networksWolbachia

Identifiers

PMID30266092
PMCPMC6161386

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.