Evidence map›Paper›PMID 30264658›Full record

ArticleJournal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc2018

Identification of Histophilus somni by a nanomaterial optical fiber biosensor assay.

Aloka B Bandara, Ziwei Zuo, Kelly McCutcheon, Siddharth Ramachandran, James R Heflin, Thomas J Inzana

Open access · bronzeAbstract read
In one paragraph

Article in Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Aloka B BandaraDepartment of Biomedical Sciences and Pathobiology, Virginia-Maryland College of Veterinary Medicine (Bandara, Inzana).
Ziwei ZuoDepartment of Biomedical Sciences and Pathobiology, Virginia-Maryland College of Veterinary Medicine (Bandara, Inzana).
Kelly McCutcheonDepartment of Biomedical Sciences and Pathobiology, Virginia-Maryland College of Veterinary Medicine (Bandara, Inzana).
Siddharth RamachandranDepartment of Biomedical Sciences and Pathobiology, Virginia-Maryland College of Veterinary Medicine (Bandara, Inzana).
James R HeflinDepartment of Biomedical Sciences and Pathobiology, Virginia-Maryland College of Veterinary Medicine (Bandara, Inzana).
Thomas J InzanaDepartment of Biomedical Sciences and Pathobiology, Virginia-Maryland College of Veterinary Medicine (Bandara, Inzana).
Virginia Tech · USBoston University · USVirginia–Maryland College of Veterinary Medicine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Histophilus somni is an opportunistic pathogen responsible for respiratory and systemic diseases of cattle and sheep. Rapid and accurate detection of H. somni is essential to distinguish H. somni from other potential pathogens for proper control and treatment of infections. Nanomaterial optical fiber biosensors (NOFS) recognize analyte interactions, such as DNA hybridization, with high specificity and sensitivity, and were applied to detect H. somni DNA in culture and clinical samples. An ionic self-assembled multilayer (ISAM) film was fabricated on a long-period grating optical fiber, and a biotinylated, nucleotide probe complementary to the H. somni 16S rDNA gene was coupled to the ISAM film. Exposure of the ISAM::probe to ⩾100 killed cells of H. somni strain 2336 without DNA amplification resulted in attenuation of light transmission of ⩾9.4%. Exposure of the complexed fiber to Escherichia coli or non- H. somni species of Pasteurellaceae reduced light transmission by ⩽3.4%. Exposure of the ISAM::probe to blood, bronchoalveolar fluid, or spleen from mice or calves infected with H. somni resulted in ⩾24.3% transmission attenuation. The assay correctly detected all 6 strains of H. somni tested from culture, or tissues from 3 separate mice and calves tested in duplicate. Six heterologous strains (representing 6 genera) reacted at below the cutoff value of 4.87% attenuation of light transmission. NOFS detected at least 100 H. somni cells without DNA amplification within 45 min with high specificity. Although different fibers could vary in signal sensitivity, this did not affect the sensitivity or specificity of the assay.

Indexed as

AnimalsBiosensing TechniquesCattleDNA, BacterialMaleMiceMice, Inbred BALB CNanostructuresOptical FibersPasteurellaceaePasteurellaceae InfectionsSensitivity and SpecificityDNA, BacterialHistophilus somnioptical fiber biosensor assay

Identifiers

PMID30264658
PMCPMC6505835
OpenAlexW2892827963

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.