Evidence map›Paper›PMID 30260998›Full record

ArticlePloS one2018

CRISPR/Cas9 engineering of a KIM-1 reporter human proximal tubule cell line.

Ruth Ann Veach, Matthew H Wilson

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. The Vanderbilt O'Brien Kidney Center.American journal of physiology. Renal physiology · 2021
    Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Ruth Ann VeachDepartment of Veterans Affairs, Nashville, Tennessee, United States of America.
Matthew H WilsonDepartment of Veterans Affairs, Nashville, Tennessee, United States of America.ORCID 0000-0002-3776-8350

Funding

Vanderbilt O'Brien Kidney Center - Core D - Clinical and Translational CoreP30DK114809 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ZENT, ROY · 2017 to 2021
$5.9M
Novel cell therapy for sustained therapeutic protein delivery in vivoR01DK093660 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI WILSON, MATTHEW H · 2012 to 2022
$3.4M
Kidney specific site-directed integration for cystinuriaI01BX002190 · VA · VETERANS HEALTH ADMINISTRATION · PI WILSON, MATTHEW H · 2014 to 2017
–
BLRD VA I01 BX002190BLRD VA I01 BX004258NIDDK NIH HHS P30 DK114809NIDDK NIH HHS R01 DK093660
6 · The paper itself

Abstract

We used the CRISPR/Cas9 system to knock-in reporter transgenes at the kidney injury molecule-1 (KIM-1) locus and isolated human proximal tubule cell (HK-2) clones. PCR verified targeted knock-in of the luciferase and eGFP reporter at the KIM-1 locus. HK-2-KIM-1 reporter cells responded to various stimuli including hypoxia, cisplatin, and high glucose, indicative of upregulation of KIM-1 expression. We attempted using CRISPR/Cas9 to also engineer the KIM-1 reporter in telomerase-immortalized human RPTEC cells. However, these cells demonstrated an inability to undergo homologous recombination at the target locus. KIM-1-reporter human proximal tubular cells could be valuable tools in drug discovery for molecules inhibiting kidney injury. Additionally, our gene targeting strategy could be used in other cell lines to evaluate the biology of KIM-1 in vitro or in vivo.

Indexed as

Acute Kidney InjuryCell LineCisplatinCRISPR-Cas SystemsGene Knock-In TechniquesGenes, ReporterGene TargetingGenetic EngineeringGlucoseGreen Fluorescent ProteinsHepatitis A Virus Cellular Receptor 1Homologous RecombinationHumansKidney Tubules, ProximalLuciferasesUp-RegulationCisplatinenhanced green fluorescent proteinGlucoseGreen Fluorescent ProteinsHAVCR1 protein, humanHepatitis A Virus Cellular Receptor 1Luciferases

Identifiers

PMID30260998
PMCPMC6160069

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.