Evidence map›Paper›PMID 30260585›Full record

ArticleMicrobiologyOpen2019

Comparative proteomic analysis of Methanothermobacter thermautotrophicus reveals methane formation from H

Cong Liu, Lihui Mao, Xiongmin Zheng, Jiangan Yuan, Beijuan Hu, Yaohui Cai, Hongwei Xie, Xiaojue Peng, Xia Ding

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Cong LiuSchool of Life Sciences and Institute of Life Science, Nanchang University, Nanchang, Jiangxi, China.
Lihui MaoSchool of Life Sciences and Institute of Life Science, Nanchang University, Nanchang, Jiangxi, China.
Xiongmin ZhengSchool of Life Sciences and Institute of Life Science, Nanchang University, Nanchang, Jiangxi, China.
Jiangan YuanSchool of Life Sciences and Institute of Life Science, Nanchang University, Nanchang, Jiangxi, China.
Beijuan HuSchool of Life Sciences and Institute of Life Science, Nanchang University, Nanchang, Jiangxi, China.
Yaohui CaiJiangxi Super-rice Research and Development Center, Jiangxi Academy of Agricultural Sciences, Nanchang, Jiangxi, China.
Hongwei XieJiangxi Super-rice Research and Development Center, Jiangxi Academy of Agricultural Sciences, Nanchang, Jiangxi, China.
Xiaojue PengSchool of Life Sciences and Institute of Life Science, Nanchang University, Nanchang, Jiangxi, China.
Xia DingSchool of Life Sciences and Institute of Life Science, Nanchang University, Nanchang, Jiangxi, China.ORCID 0000-0003-1535-2642
Nanchang University · CNJiangxi Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The growth of all methanogens is limited to a specific temperature range. However, Methanothermobacter thermautotrophicus can be found in a variety of natural and artificial environments, the temperatures of which sometimes even exceed the temperature growth ranges of thermophiles. As a result, the extent to which methane production and survival are affected by temperature remains unclear. To investigate the mechanisms of methanogenesis that Archaea have evolved to cope with drastic temperature shifts, the responses of Methanothermobacter thermautotrophicus to temperature were investigated under a high temperature growth (71°C) and cold shock (4°C) using Isobaric tags for relative and absolute quantitation (iTRAQ). The results showed that methane formation is decreased and that protein folding and degradation are increased in both high- and low-temperature treatments. In addition, proteins predicted to be involved in processing environmental information processing and in cell membrane/wall/envelope biogenesis may play key roles in affecting methane formation and enhancing the response of M. thermautotrophicus to temperature stress. Analysis of the genomic locations of the genes corresponding to these temperature-dependent proteins predicted that 77 of the genes likely to form 32 gene clusters. Here, we assess the response of M. thermautotrophicus to different temperatures and provide a new level of understanding of methane formation and cellular putative adaptive responses.

Indexed as

Cold TemperatureHot TemperatureArchaeal ProteinsCarbon DioxideGenes, ArchaealGenetic LociHydrogenMethaneMethanobacteriaceaeMultigene FamilyProtein FoldingProteolysisProteomeArchaeal ProteinsCarbon DioxideHydrogenMethaneProteomeiTRAQmethane formationMethanothermobacter thermautotrophicusproteomicstemperature stress

Identifiers

PMID30260585
PMCPMC6528648
OpenAlexW2892241109

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.