Evidence map›Paper›PMID 30259713›Full record

ArticleMolecular genetics & genomic medicine2018

A novel large germ line deletion in adenomatous polyposis coli (APC) gene associated with familial adenomatous polyposis.

Farzaneh Pouya, Afsaneh Mojtabanezhad Shariatpanahi, Kamran Ghaffarzadegan, Seyed Abbas Tabatabaee Yazdi, Hamed Golmohammadzadeh, Ghodratollah Soltani, Kian Aminian Toosi, Mohammad Amin Kerachian

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. A novel pathogenicFrontiers in genetics · 2026
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4 · The record

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5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Farzaneh PouyaDepartment of Medical Genetics, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Afsaneh Mojtabanezhad ShariatpanahiCancer Genetics Research Unit, Reza Radiotherapy and Oncology Center, Mashhad, Iran.
Kamran GhaffarzadeganRazavi Cancer Research Center, Razavi Hospital, Imam Reza International University, Mashhad, Iran.
Seyed Abbas Tabatabaee YazdiDepartment of Pathology, Mashhad University of Medical Sciences, Mashhad, Iran.
Hamed GolmohammadzadehEndoscopic and Minimally Invasive Surgery Research Center, Mashhad University of Medical Sciences, Mashhad, Iran.
Ghodratollah SoltaniCancer Genetics Research Unit, Reza Radiotherapy and Oncology Center, Mashhad, Iran.
Kian Aminian ToosiCancer Genetics Research Unit, Reza Radiotherapy and Oncology Center, Mashhad, Iran.
Mohammad Amin KerachianDepartment of Medical Genetics, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.ORCID 0000-0001-5016-2882
Mashhad University of Medical Sciences · IRImam Reza Hospital · IRImam Reza International University · IRIslamic Azad University, Mashhad · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFamilial adenomatous polyposis (FAP) is a familial colorectal cancer predisposition syndrome characterized by the development of numerous colorectal polyps, which is inherited in an autosomal dominant manner. FAP is caused by germ line mutations in adenomatous polyposis coli (APC) gene. Here, we described the identification of a causative APC gene deletion associated with FAP in an Iranian family.

methodsDiagnosis of FAP was based on clinical findings, family history, and medical records (colonoscopy and histopathological data) after the patients were referred to Reza Radiotherapy and Oncology Center, Iran, for colonoscopy. Blood samples were collected, and genomic DNA was extracted. APC mutation screening was conducted by target next-generation sequencing and quantitative real-time PCR.

resultsA novel heterozygous large deletion mutation, c.(135+1_136-1)_(*2113+1_*2114-1) spanning exon 3 to 16 [EX3_16 DEL] of APC gene (GenBank Accession# MG712911), was detected in a proband and all her affected relatives in five generations, which was absent in unaffected family members and normal controls.

conclusionsThis novel deletion is the first report, describing the largest deletion of APC gene. Our novel finding contributes to a more comprehensive database of germ line mutations of APC gene that could be used in medical practice for the molecular diagnosis, risk assessment susceptibility of the disease for the FAP patients.

Indexed as

Gene DeletionGerm-Line MutationAdenomatous Polyposis ColiAdenomatous Polyposis Coli ProteinAdolescentAdultAgedFemaleHumansMaleMiddle AgedPedigreeAdenomatous Polyposis Coli ProteinAPC protein, humanAPC genecolorectal cancerFamilial adenomatous polyposislarge exon deletiontargeted next-generation sequencing

Identifiers

PMID30259713
PMCPMC6305644
OpenAlexW2893080673

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.