Evidence map›Paper›PMID 30258107›Full record

ArticleHeredity2019

Selection, drift, and introgression shape MHC polymorphism in lizards.

K Sagonas, A Runemark, A Antoniou, P Lymberakis, P Pafilis, E D Valakos, N Poulakakis, B Hansson

Abstract read
In one paragraph

Article in Heredity, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Regulatory changes in pterin and carotenoid genes underlie balanced color polymorphisms in the wall lizard.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

K SagonasSchool of Biological and Chemical Sciences, Queen Mary University of London, London, E1 4NS, UK. k.sagonas@qmul.ac.uk.ORCID http://orcid.org/0000-0002-5972-210X
A RunemarkDepartment of Biology, Lund University, Ecology Building, SE-223 62, Lund, Sweden.
A AntoniouInstitute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Gournes Pediados, 71003, Heraklion, Crete, Greece.
P LymberakisNatural History Museum of Crete, School of Sciences and Engineering, University of Crete, 71409, Heraklion, Crete, Greece.
P PafilisDepartment of Zoology and Marine Biology, Faculty of Biology, National and Kapodistrian University of Athens, Panepistimioupoli Zografou, 15784, Athens, Greece.
E D ValakosDepartment of Human and Animal Physiology, Faculty of Biology, National and Kapodistrian University of Athens, Panepistimioupoli Zografou, 15784, Athens, Greece.
N Poulakakis *Natural History Museum of Crete, School of Sciences and Engineering, University of Crete, 71409, Heraklion, Crete, Greece.
B Hansson *Department of Biology, Lund University, Ecology Building, SE-223 62, Lund, Sweden.

Funding

Vetenskapsrådet (Swedish Research Council) 621-2016-689
6 · The paper itself

Abstract

The major histocompatibility complex (MHC) has long served as a model for the evolution of adaptive genetic diversity in wild populations. Pathogen-mediated selection is thought to be a main driver of MHC diversity, but it remains elusive to what degree selection shapes MHC diversity in complex biogeographical scenarios where other evolutionary processes (e.g. genetic drift and introgression) may also be acting. Here we focus on two closely related green lizard species, Lacerta trilineata and L. viridis, to address the evolutionary forces acting on MHC diversity in populations with different biogeographic structure. We characterized MHC class I exon 2 and exon 3, and neutral diversity (microsatellites), to study the relative importance of selection, drift, and introgression in shaping MHC diversity. As expected, positive selection was a significant force shaping the high diversity of MHC genes in both species. Moreover, introgression significantly increased MHC diversity in mainland populations, with a primary direction of gene flow from L. viridis to L. trilineata. Finally, we found significantly fewer MHC alleles in island populations, but maintained MHC sequence and functional diversity, suggesting that positive selection counteracted the effect of drift. Overall, our data support that different evolutionary processes govern MHC diversity in different biogeographical scenarios: positive selection occurs broadly while introgression acts in sympatry and drift when the population sizes decrease.

Indexed as

AnimalsGene FlowGenetic DriftGenetic IntrogressionGenetics, PopulationGenetic VariationLizardsMajor Histocompatibility ComplexPopulation DensitySelection, GeneticSympatry

Identifiers

PMID30258107
PMCPMC6460769

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.