Evidence map›Paper›PMID 30257906›Full record

ArticleJournal of clinical microbiology2018

Effect of Vaccination on Pneumococci Isolated from the Nasopharynx of Healthy Children and the Middle Ear of Children with Otitis Media in Iceland.

Sigríður J Quirk, Gunnsteinn Haraldsson, Helga Erlendsdóttir, Martha Á Hjálmarsdóttir, Andries J van Tonder, Birgir Hrafnkelsson, Samuel Sigurdsson, Stephen D Bentley, Ásgeir Haraldsson, Angela B Brueggemann and 1 more

Abstract readComparative Study
In one paragraph

Article in Journal of clinical microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
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  9. Article
  10. Serotype distribution and antimicrobial resistance ofIranian journal of microbiology · 2022
    Article
  11. Dynamic changes in otopathogens colonizing the nasopharynx and causing acute otitis media in children after 13-valent (PCV13) pneumococcal conjugate vaccination during 2015-2019.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2022
    Article
  12. Epidemiology of non-vaccine serotypes ofHuman vaccines & immunotherapeutics · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Host-Malaria Parasite Interactions and Impacts on Mutual Evolution.Frontiers in cellular and infection microbiology · 2020
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Sigríður J QuirkUniversity of Iceland, Faculty of Medicine, Reykjavík, Iceland.
Gunnsteinn HaraldssonUniversity of Iceland, Faculty of Medicine, Reykjavík, Iceland.
Helga ErlendsdóttirUniversity of Iceland, Faculty of Medicine, Reykjavík, Iceland.
Martha Á HjálmarsdóttirUniversity of Iceland, Faculty of Medicine, Reykjavík, Iceland.
Andries J van TonderParasites and Microbes, Wellcome Sanger Institute, Hinxton, United Kingdom.
Birgir HrafnkelssonUniversity of Iceland, Department of Mathematics, Reykjavik, Iceland.
Samuel SigurdssonUniversity of Iceland, Faculty of Medicine, Reykjavík, Iceland.
Stephen D BentleyParasites and Microbes, Wellcome Sanger Institute, Hinxton, United Kingdom.
Ásgeir HaraldssonUniversity of Iceland, Faculty of Medicine, Reykjavík, Iceland.
Angela B BrueggemannNuffield Department of Medicine, University of Oxford, Oxford, United Kingdom.
Karl G KristinssonUniversity of Iceland, Faculty of Medicine, Reykjavík, Iceland Karl@landspitali.is.

Funding

Wellcome TrustWellcome Trust 04992/Z/14/ZWellcome Trust 083511/Z/07/Z
6 · The paper itself

Abstract

Vaccination with pneumococcal conjugate vaccines (PCVs) disrupts the pneumococcal population. Our aim was to determine the impact of the 10-valent PCV on the serotypes, genetic lineages, and antimicrobial susceptibility of pneumococci isolated from children in Iceland. Pneumococci were collected between 2009 and 2017 from the nasopharynges of healthy children attending 15 day care centers and from the middle ears (MEs) of children with acute otitis media from the greater Reykjavik capital area. Isolates were serotyped and tested for antimicrobial susceptibility. Whole-genome sequencing (WGS) was performed on alternate isolates from 2009 to 2014, and serotypes and multilocus sequence types (STs) were extracted from the WGS data. Two study periods were defined: 2009 to 2011 (PreVac) and 2012 to 2017 (PostVac). The overall nasopharyngeal carriage rate was similar between the two periods (67.3% PreVac and 61.5% PostVac,

Indexed as

Anti-Bacterial AgentsCarrier StateChildChild, PreschoolDrug Resistance, Multiple, BacterialEar, MiddleGenome, BacterialHumansIcelandInfantInfant, NewbornMicrobial Sensitivity TestsMultilocus Sequence TypingNasopharynxOtitis MediaPneumococcal Infections10-valent pneumococcal conjugate vaccineAnti-Bacterial AgentsPneumococcal VaccinescarriageepidemiologyIcelandmolecular epidemiologyotitis mediapneumococcusStreptococcus pneumoniaevaccinationvaccine

Identifiers

PMID30257906
PMCPMC6258863

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.