Evidence map›Paper›PMID 30257865›Full record

ArticleThe Journal of biological chemistry2018

Pif1 helicase unfolding of G-quadruplex DNA is highly dependent on sequence and reaction conditions.

Alicia K Byrd, Matthew R Bell, Kevin D Raney

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
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  12. Review
  13. Role and Regulation of Pif1 Family Helicases at the Replication Fork.International journal of molecular sciences · 2022
    Review
  14. Article
  15. Article
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  17. Article
  18. G-quadruplex DNA: a novel target for drug design.Cellular and molecular life sciences : CMLS · 2021
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Alicia K ByrdFrom the Department of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205.
Matthew R BellFrom the Department of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205.
Kevin D RaneyFrom the Department of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, Arkansas 72205. Electronic address: raneykevind@uams.edu.
University of Arkansas for Medical Sciences · USUniversity of Arkansas Medical Center · US

Funding

Functions and Mechanisms of Helicases and G-Quadruplex Nucleic AcidsR35GM122601 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI RANEY, KEVIN DOUGLAS · 2017 to 2021
$2.5M
DNA Helicases: Mechanisms and FunctionsR01GM098922 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI RANEY, KEVIN DOUGLAS · 2011 to 2017
$1.7M
NIGMS NIH HHS R01 GM098922NIGMS NIH HHS R35 GM122601
6 · The paper itself

Abstract

In addition to unwinding double-stranded nucleic acids, helicase activity can also unfold noncanonical structures such as G-quadruplexes. We previously characterized Pif1 helicase catalyzed unfolding of parallel G-quadruplex DNA. Here we characterized unfolding of the telomeric G-quadruplex, which can fold into antiparallel and mixed hybrid structures and found significant differences. Telomeric DNA sequences are unfolded more readily than the parallel quadruplex formed by the c-MYC promoter in K

Indexed as

G-QuadruplexesAdenosine TriphosphateBiochemical PhenomenaDNA HelicasesDNA, Single-StrandedHumansHydrolysisKineticsNucleic Acid ConformationTransition TemperatureAdenosine TriphosphateDNA HelicasesDNA, Single-StrandedPIF1 protein, humanDNA helicaseDNA-protein interactionDNA unwindingenzyme kineticsenzyme mechanismG-quadruplexPif1pre-steady-state kineticssecondary structure

Identifiers

PMID30257865
PMCPMC6240867
OpenAlexW2893373509

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.