Evidence map›Paper›PMID 30256918›Full record

ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2018

Multiple links connect central carbon metabolism to DNA replication initiation and elongation in Bacillus subtilis.

Hamid Nouri, Anne-Françoise Monnier, Solveig Fossum-Raunehaug, Monika Maciag-Dorszynska, Armelle Cabin-Flaman, François Képès, Grzegorz Wegrzyn, Agnieszka Szalewska-Palasz, Vic Norris, Kirsten Skarstad and 1 more

Open access · goldAbstract read
In one paragraph

Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Review
  3. Hunting the Cell CycleLife (Basel, Switzerland) · 2024
    Article
  4. Article
  5. Review
  6. Review
  7. The Replicative DnaE Polymerase ofLife (Basel, Switzerland) · 2023
    Article
  8. Article
  9. Article
  10. DNA Methylation inmSystems · 2022
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Hamid NouriiSSB, Génopole, CNRS, UEVE, Université Paris-Saclay, Evry France.
Anne-Françoise MonnierMICALIS, INRA, Jouy en Josas, France.
Solveig Fossum-RaunehaugDepartment of Cell Biology, Oslo University Hospital, University of Oslo, Oslo, Norway.
Monika Maciag-DorszynskaDepartment of Molecular Biology, University of Gdansk, Gdansk, Poland.
Armelle Cabin-FlamanLaboratoire MERCI, AMMIS, Faculté des Sciences, Mont-Saint-Aignan, France.
François KépèsiSSB, Génopole, CNRS, UEVE, Université Paris-Saclay, Evry France.
Grzegorz WegrzynDepartment of Molecular Biology, University of Gdansk, Gdansk, Poland.
Agnieszka Szalewska-PalaszDepartment of Molecular Biology, University of Gdansk, Gdansk, Poland.
Vic NorrisLaboratoire MERCI, AMMIS, Faculté des Sciences, Mont-Saint-Aignan, France.
Kirsten SkarstadDepartment of Cell Biology, Oslo University Hospital, University of Oslo, Oslo, Norway.
Laurent JanniereiSSB, Génopole, CNRS, UEVE, Université Paris-Saclay, Evry France.
Centre National de la Recherche Scientifique · FRUniversity of Gdańsk · PLAmer Sports (France) · FROslo University Hospital · NOMicrobiologie de l’alimentation au service de la santé · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA replication is coupled to growth by an unknown mechanism. Here, we investigated this coupling by analyzing growth and replication in 15 mutants of central carbon metabolism (CCM) cultivated in three rich media. In about one-fourth of the condition tested, defects in replication resulting from changes in initiation or elongation were detected. This uncovered 11 CCM genes important for replication and showed that some of these genes have an effect in one, two or three media. Additional results presented here and elsewhere (Jannière, L., Canceill, D., Suski, C., et al. (2007), PLoS One, 2, e447.) showed that, in the LB medium, the CCM genes important for DNA elongation (gapA and ackA) are genetically linked to the lagging strand polymerase DnaE while those important for initiation (pgk and pykA) are genetically linked to the replication enzymes DnaC (helicase), DnaG (primase) and DnaE. Our work thus shows that the coupling between growth and replication involves multiple, medium-dependent links between CCM and replication. They also suggest that changes in CCM may affect initiation by altering the functional recruitment of DnaC, DnaG and DnaE at the chromosomal origin, and may affect elongation by altering the activity of DnaE at the replication fork. The underlying mechanism is discussed.

Indexed as

DNA ReplicationBacillus subtilisCarbonCulture MediaMutationCarbonCulture Media

Identifiers

PMID30256918
PMCPMC6289782
OpenAlexW2892996816

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.