Evidence map›Paper›PMID 30255988›Full record

ArticleCytoskeleton (Hoboken, N.J.)2018

Qualitative and quantitative evaluation of TPM transcripts and proteins in developing striated chicken muscles indicate TPM4α is the major sarcomeric cardiac tropomyosin from early embryonic life to adulthood.

Dipak K Dube, Syamalima Dube, Runa Shrestha, Lynn Abbott, Samender Randhawa, Vasundhara Muthu, Yingli Fan, Jushuo Wang, Jean M Sanger, Joseph W Sanger and 1 more

Open access · greenAbstract read
In one paragraph

Article in Cytoskeleton (Hoboken, N.J.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Dipak K DubeDepartment of Medicine, Upatate Medical University, Syracuse, New York.ORCID 0000-0002-0205-4761
Syamalima DubeDepartment of Medicine, Upatate Medical University, Syracuse, New York.
Runa ShresthaDepartment of Medicine, Upatate Medical University, Syracuse, New York.
Lynn AbbottDepartment of Medicine, Upatate Medical University, Syracuse, New York.
Samender RandhawaDepartment of Medicine, Upatate Medical University, Syracuse, New York.
Vasundhara MuthuDepartment of Medicine, Upatate Medical University, Syracuse, New York.
Yingli FanDepartment of Cell and Developmental Biology, Upatate Medical University, Syracuse, New York.
Jushuo WangDepartment of Cell and Developmental Biology, Upatate Medical University, Syracuse, New York.
Jean M SangerDepartment of Cell and Developmental Biology, Upatate Medical University, Syracuse, New York.
Joseph W SangerDepartment of Cell and Developmental Biology, Upatate Medical University, Syracuse, New York.
Bernard J PoieszDepartment of Medicine, Upatate Medical University, Syracuse, New York.
SUNY Upstate Medical University · US

Funding

Analysis of Z-band assembly and maintenance in living skeletal muscle cellsR01AR057063 · NIAMS · UPSTATE MEDICAL UNIVERSITY · PI SANGER, JEAN M, SANGER, JOSEPH WILLIAM · 2009 to 2013
$1.7M
Dynamics of Proteins in the A-bands of Cardiac MuscleR01HL080426 · NHLBI · UPSTATE MEDICAL UNIVERSITY · PI SANGER, JOSEPH WILLIAM · 2006 to 2009
$1.4M
NHLBI NIH HHS R01 HL080426NIAMS NIH HHS R01 AR057063
6 · The paper itself

Abstract

The chicken has been used since the 1980s as an animal model for developmental studies regarding tropomyosin isoform diversity in striated muscles, however, the pattern of expression of transcripts as well as the corresponding TPM proteins of various tropomyosin isoforms in avian hearts are not well documented. In this study, using conventional and qRT-PCR, we report the expression of transcripts for various sarcomeric TPM isoforms in striated muscles through development. Transcripts of both TPM1α and TPM1κ, the two sarcomeric isoforms of the TPM1 gene, are expressed in embryonic chicken hearts but disappear in post hatch stages. TPM1α transcripts are expressed in embryonic and adult skeletal muscle. The sarcomeric isoform of the TPM2 gene is expressed mostly in embryonic skeletal muscles. As reported earlier, TPM3α is expressed in embryonic heart and skeletal muscle but significantly lower in adult striated muscle. TPM4α transcripts are expressed from embryonic to adult chicken hearts but not in skeletal muscle. Our 2D Western blot analyses using CH1 monoclonal antibody followed by mass spectra evaluations found TPM4α protein is the major sarcomeric tropomysin expressed in embryonic chicken hearts. However, in 7-day-old embryonic hearts, a minute quantity of TPM1α or TPM1κ is also expressed. This finding suggests that sarcomeric TPM1 protein may play some important role in cardiac contractility and/or cardiac morphogenesis during embryogenesis. Since only the transcripts of TPM4α are expressed in adult chicken hearts, it is logical to presume that TPM4α is the only sarcomeric TPM protein produced in adult cardiac tissues.

Indexed as

AnimalsChickensEmbryonic DevelopmentMuscle, SkeletalProtein IsoformsSarcomeresTropomyosinProtein IsoformsTropomyosin2D Western blotdevelopmentLC-MS/MSqRT-PCRTPM isoforms

Identifiers

PMID30255988
PMCPMC6279486
OpenAlexW2893642674

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.