Evidence map›Paper›PMID 30255818›Full record

ArticleBMC genetics2018

Association analyses of repeated measures on triglyceride and high-density lipoprotein levels: insights from GAW20.

Saurabh Ghosh, David W Fardo

Abstract read
In one paragraph

Article in BMC genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
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0citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

2 authors.

Saurabh GhoshHuman Genetics Unit, Indian Statistical Institute, 203 B.T. Road, Kolkata, 700108, India. saurabh@isical.ac.in.
David W FardoDepartment of Biostatistics, University of Kentucky, 111 Washington Ave, Lexington, KY, 40536, USA.

Funding

Genetic and Environmental Determinants of TriglyceridesU01HL072524 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI ARNETT, DONNA K · 2002 to 2008
$11.9M
GENETIC ANALYSIS OF COMMON DISEASES: AN EVALUATIONR01GM031575 · NIGMS · UNIVERSITY OF TEXAS RIO GRANDE VALLEY · PI ALMASY, LAURA A. · 1985 to 2016
$7.8M
Genomewide Association Study of Lipid Response to Fenofibrate and Dietary FatR01HL091357 · NHLBI · UNIVERSITY OF KENTUCKY · PI ARNETT, DONNA K · 2008 to 2018
$5.8M
Epigenetic Determinants of Lipid Response to Dietary Fat and FenofibrateR01HL104135 · NHLBI · UNIVERSITY OF KENTUCKY · PI ARNETT, DONNA K · 2010 to 2015
$5.5M
NHLBI NIH HHS R01 HL091357NHLBI NIH HHS R01 HL104135NHLBI NIH HHS U01 HL072524NIGMS NIH HHS R01 GM031575
6 · The paper itself

Abstract

backgroundThe GAW20 group formed on the theme of methods for association analyses of repeated measures comprised 4sets of investigators. The provided "real" data set included genotypes obtained from a human whole-genome association study based on longitudinal measurements of triglycerides (TGs) and high-density lipoprotein in addition to methylation levels before and after administration of fenofibrate. The simulated data set contained 200 replications of methylation levels and posttreatment TGs, mimicking the real data set.

resultsThe different investigators in the group focused on the statistical challenges unique to family-based association analyses of phenotypes measured longitudinally and applied a wide spectrum of statistical methods such as linear mixed models, generalized estimating equations, and quasi-likelihood-based regression models. This article discusses the varying strategies explored by the group's investigators with the common goal of improving the power to detect association with repeated measures of a phenotype.

conclusionsAlthough it is difficult to identify a common message emanating from the different contributions because of the diversity in the issues addressed, the unifying theme of the contributions lie in the search for novel analytic strategies to circumvent the limitations of existing methodologies to detect genetic association.

Indexed as

Genome-Wide Association StudyHumansHypertriglyceridemiaHypoglycemic AgentsLikelihood FunctionsLinear ModelsLipoproteins, HDLLongitudinal StudiesPhenotypePolymorphism, Single NucleotideTriglyceridesHypoglycemic AgentsLipoproteins, HDLTriglyceridesEpigenome-wide associationGenome-wide associationLinear mixed modelsLongitudinal dataMultivariate phenotypesQuasi-likelihood

Identifiers

PMID30255818
PMCPMC6157164

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.