Evidence map›Paper›PMID 30255772›Full record

ArticleBMC genetics2018

Characterization of the contribution of shared environmental and genetic factors to metabolic syndrome methylation heritability and familial correlations.

Lindsay Fernández-Rhodes, Annie Green Howard, Ran Tao, Kristin L Young, Mariaelisa Graff, Allison E Aiello, Kari E North, Anne E Justice

Abstract read
In one paragraph

Article in BMC genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Ten Years of EWAS.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2021
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lindsay Fernández-RhodesDepartment of Epidemiology, University of North Carolina at Chapel Hill, 137 East Franklin Street, Chapel Hill, NC, 27514, USA. fernandez-rhodes@unc.edu.
Annie Green HowardCarolina Population Center, University of North Carolina at Chapel Hill, 136 East Franklin Street, Chapel Hill, NC, 27514, USA.
Ran TaoDepartment of Biostatistics, Vanderbilt University Medical Center, 2525 West End Avenue, Nashville, TN, 37203, USA.
Kristin L YoungDepartment of Epidemiology, University of North Carolina at Chapel Hill, 137 East Franklin Street, Chapel Hill, NC, 27514, USA.
Mariaelisa GraffDepartment of Epidemiology, University of North Carolina at Chapel Hill, 137 East Franklin Street, Chapel Hill, NC, 27514, USA.
Allison E AielloDepartment of Epidemiology, University of North Carolina at Chapel Hill, 137 East Franklin Street, Chapel Hill, NC, 27514, USA.
Kari E NorthDepartment of Epidemiology, University of North Carolina at Chapel Hill, 137 East Franklin Street, Chapel Hill, NC, 27514, USA.
Anne E JusticeDepartment of Epidemiology, University of North Carolina at Chapel Hill, 137 East Franklin Street, Chapel Hill, NC, 27514, USA.

Funding

UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Stephanie Engel · 2001 to 2026
$36.3M
POPULATION STUDIEST32HD007168 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ELIZABETH A FRANKENBERG · 1985 to 2026
$13.8M
Genetic and Environmental Determinants of TriglyceridesU01HL072524 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI ARNETT, DONNA K · 2002 to 2008
$11.9M
Cardiovascular Epidemiology Training GrantT32HL007055 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Wayne D. Rosamond · 1986 to 2026
$10.0M
Research Services CoreP2CHD050924 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KAREN B GUZZO · 2015 to 2026
$9.6M
GENETIC ANALYSIS OF COMMON DISEASES: AN EVALUATIONR01GM031575 · NIGMS · UNIVERSITY OF TEXAS RIO GRANDE VALLEY · PI ALMASY, LAURA A. · 1985 to 2016
$7.8M
Genomewide Association Study of Lipid Response to Fenofibrate and Dietary FatR01HL091357 · NHLBI · UNIVERSITY OF KENTUCKY · PI ARNETT, DONNA K · 2008 to 2018
$5.8M
North Carolina Translational & Clinical Sciences Institute (NC TraCS)KL2TR001109 · NCATS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BUSE, JOHN BERNARD, CAREY, TIMOTHY S · 2013 to 2017
$5.7M
Epigenetic Determinants of Lipid Response to Dietary Fat and FenofibrateR01HL104135 · NHLBI · UNIVERSITY OF KENTUCKY · PI ARNETT, DONNA K · 2010 to 2015
$5.5M
Sex- and Smoking- Specific DNA Methylation Signatures of Central Adiposity ChangeK99HL130580 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI JUSTICE, ANNE · 2016 to 2017
$217k
NCATS NIH HHS KL2 TR001109NHLBI NIH HHS K99 HL130580NHLBI NIH HHS R01 HL091357NHLBI NIH HHS R01 HL104135NHLBI NIH HHS T32 HL007055NHLBI NIH HHS U01 HL072524NICHD NIH HHS P2C HD050924NICHD NIH HHS T32 HD007168NIEHS NIH HHS P30 ES010126NIGMS NIH HHS R01 GM031575
6 · The paper itself

Abstract

backgroundTransgenerational epigenetic inheritance has been posited as a possible contributor to the observed heritability of metabolic syndrome (MetS). Yet the extent to which estimates of epigenetic inheritance for DNA methylation sites are inflated by environmental and genetic covariance within families is still unclear. We applied current methods to quantify the environmental and genetic contributors to the observed heritability and familial correlations of four previously associated MetS methylation sites at three genes (CPT1A, SOCS3 and ABCG1) using real data made available through the GAW20.

resultsOur findings support the role of both shared environment and genetic variation in explaining the heritability of MetS and the four MetS cytosine-phosphate-guanine (CpG) sites, although the resulting heritability estimates were indistinguishable from one another. Familial correlations by type of relative pair generally followed our expectation based on relatedness, but in the case of sister and parent pairs we observed nonsignificant trends toward greater correlation than expected, as would be consistent with the role of shared environmental factors in the inflation of our estimated correlations.

conclusionsOur work provides an interesting and flexible statistical framework for testing models of epigenetic inheritance in the context of human family studies. Future work should endeavor to replicate our findings and advance these methods to more robustly describe epigenetic inheritance patterns in human populations.

Indexed as

ATP Binding Cassette Transporter, Subfamily G, Member 1Carnitine O-PalmitoyltransferaseCpG IslandsDNA MethylationGenetic VariationGenome-Wide Association StudyHumansInheritance PatternsMetabolic SyndromeSuppressor of Cytokine Signaling 3 ProteinABCG1 protein, humanATP Binding Cassette Transporter, Subfamily G, Member 1Carnitine O-PalmitoyltransferaseCPT1A protein, humanSOCS3 protein, humanSuppressor of Cytokine Signaling 3 ProteinEpigenetic inheritanceFamilial correlationHeritabilityMetabolic syndromeMethylation

Identifiers

PMID30255772
PMCPMC6157030

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.