Evidence map›Paper›PMID 30254335›Full record

ArticleCell research2018

Small molecule inhibitors reveal allosteric regulation of USP14 via steric blockade.

Yiwei Wang, Yuxuan Jiang, Shan Ding, Jiawang Li, Ningjing Song, Yujing Ren, Danning Hong, Cai Wu, Bin Li, Feng Wang and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Cell research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed, 1 pooled it
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 1 synthesis or guideline pooled it, 123 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. AKT and DUBs: a bidirectional relationship.Cellular & molecular biology letters · 2025
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Yiwei WangTsinghua-Peking Center for Life Sciences, School of Life Sciences, Tsinghua University, Beijing, 100084, China.
Yuxuan JiangSchool of Pharmaceutical Sciences, Tsinghua University, Beijing, 100084, China.
Shan DingBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Jiawang LiSchool of Life Science, Beijing Institute of Technology, Beijing, 100081, China.
Ningjing SongBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Yujing RenSchool of Life Science, Beijing Institute of Technology, Beijing, 100081, China.
Danning HongSchool of Life Science, Beijing Institute of Technology, Beijing, 100081, China.
Cai WuSchool of Pharmaceutical Sciences, Tsinghua University, Beijing, 100084, China.
Bin LiSchool of Pharmaceutical Sciences, Tsinghua University, Beijing, 100084, China.
Feng WangSchool of Life Science, Beijing Institute of Technology, Beijing, 100081, China. wfeng@bit.edu.cn.
Wei HeSchool of Pharmaceutical Sciences, Tsinghua University, Beijing, 100084, China. Whe@tsinghua.edu.cn.
Jiawei WangTsinghua-Peking Center for Life Sciences, School of Life Sciences, Tsinghua University, Beijing, 100084, China. jwwang@tsinghua.edu.cn.
Ziqing MeiBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China. meiziqing@caas.cn.
Tsinghua University · CNBeijing Institute of Technology · CNBiotechnology Research Institute · CNCenter for Life Sciences · CNChinese Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ubiquitin system is important for drug discovery, and the discovery of selective small-molecule inhibitors of deubiquitinating enzymes (DUBs) remains an active yet extremely challenging task. With a few exceptions, previously developed inhibitors have been found to bind the evolutionarily conserved catalytic centers of DUBs, resulting in poor selectivity. The small molecule IU1 was the first-ever specific inhibitor identified and exhibited surprisingly excellent selectivity for USP14 over other DUBs. However, the molecular mechanism for this selectivity was elusive. Herein, we report the high-resolution co-crystal structures of the catalytic domain of USP14 bound to IU1 and three IU1 derivatives. All the structures of these complexes indicate that IU1 and its analogs bind to a previously unknown steric binding site in USP14, thus blocking the access of the C-terminus of ubiquitin to the active site of USP14 and abrogating USP14 activity. Importantly, this steric site in USP14 is very unique, as suggested by structural alignments of USP14 with several known DUB X-ray structures. These results, in conjunction with biochemical characterization, indicate a coherent steric blockade mechanism for USP14 inhibition by compounds of the IU series. In light of the recent report of steric blockade of USP7 by FT671, this work suggests a potential generally applicable allosteric mechanism for the regulation of DUBs via steric blockade, as showcased by our discovery of IU1-248 which is 10-fold more potent than IU1.

Indexed as

Allosteric RegulationBinding SitesCatalytic DomainCrystallizationCrystallography, X-RayEnzyme InhibitorsHumansModels, MolecularProtein Structure, TertiaryPyrrolesPyrrolidinesSubstrate SpecificityUbiquitinUbiquitin-Specific Peptidase 7Ubiquitin Thiolesterase1-(1-(4-fluorophenyl)-2,5-dimethylpyrrol-3-yl)-2-pyrrolidin-1-ylethanoneEnzyme InhibitorsPyrrolesPyrrolidinesUbiquitinUbiquitin-Specific Peptidase 7Ubiquitin ThiolesteraseUSP14 protein, humanUSP7 protein, human

Identifiers

PMID30254335
PMCPMC6274642
OpenAlexW2894136107

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.