Evidence map›Paper›PMID 30254228›Full record

ArticleScientific reports2018

Diversity and Functional Evolution of Terpene Synthases in Dictyostelid Social Amoebae.

Xinlu Chen, Tobias G Köllner, Gad Shaulsky, Qidong Jia, Jeroen S Dickschat, Jonathan Gershenzon, Feng Chen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Global profiling of polyketide synthases in facultative multicellular eukaryotes.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Review
  6. Yellow polyketide pigment suppresses premature hatching in social amoeba.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Evolution of Terpene Synthases in Orchidaceae.International journal of molecular sciences · 2021
    Review
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Xinlu ChenDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, 37996, USA.ORCID 0000-0002-7560-6125
Tobias G KöllnerDepartment of Biochemistry, Max Planck Institute for Chemical Ecology, Jena, Germany.
Gad ShaulskyDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA.ORCID 0000-0002-0532-0551
Qidong JiaDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, 37996, USA.
Jeroen S DickschatKekulé-Institute of Organic Chemistry and Biochemistry, University of Bonn, Gerhard-Domagk-Straße 1, 53121, Bonn, Germany.
Jonathan GershenzonDepartment of Biochemistry, Max Planck Institute for Chemical Ecology, Jena, Germany.
Feng ChenDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, 37996, USA. fengc@utk.edu.ORCID 0000-0002-3267-4646
University of Tennessee at Knoxville · USMax Planck Institute for Chemical Ecology · DEBaylor College of Medicine · USUniversity of Bonn · DE

Funding

The molecular basis of allorecognition and its roles in development and evolution of the social amoeba D. discoideumR35GM118016 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI SHAULSKY, GAD · 2016 to 2020
$2.1M
NIGMS NIH HHS R35 GM118016
6 · The paper itself

Abstract

Dictyostelids, or social amoebae, have a unique life style in forming multicellular fruiting bodies from unicellular amoeboids upon starvation. Recently, dictyostelids were found to contain terpene synthase (TPS) genes, a gene type of secondary metabolism previously known to occur only in plants, fungi and bacteria. Here we report an evolutionary functional study of dictyostelid TPS genes. The number of TPS genes in six species of dictyostelids examined ranges from 1 to 19; and the model species Dictyostelium purpureum contains 12 genes. Using in vitro enzyme assays, the 12 TPS genes from D. purpureum were shown to encode functional enzymes with distinct product profiles. The expression of the 12 TPS genes in D. purpureum is developmentally regulated. During multicellular development, D. purpureum releases a mixture of volatile terpenes dominated by sesquiterpenes that are the in vitro products of a subset of the 12 TPS genes. The quality and quantity of the terpenes released from D. purpureum, however, bear little resemblance to those of D. discoideum, a closely related dictyostelid. Despite these variations, the conserved clade of dictyostelid TPSs, which have an evolutionary distance of more than 600 million years, has the same biochemical function, catalyzing the formation of a sesquiterpene protoillud-7-ene. Taken together, our results indicate that the dynamic evolution of dictyostelid TPS genes includes both purifying selection of an orthologous group and species-specific expansion with functional divergence. Consequently, the terpenes produced by these TPSs most likely have conserved as well as species-adaptive biological functions as chemical languages in dictyostelids.

Indexed as

Evolution, MolecularAlkyl and Aryl TransferasesBiocatalysisDictyosteliumGene Expression Regulation, DevelopmentalPhylogenySpecies SpecificityTerpenesVolatilizationAlkyl and Aryl TransferasesTerpenesterpene synthase

Identifiers

PMID30254228
PMCPMC6156593
OpenAlexW2891277670

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.