Evidence map›Paper›PMID 30254217›Full record

ArticleEuropean journal of human genetics : EJHG2019

Novel insight into the genetic basis of high-altitude pulmonary hypertension in Kyrgyz highlanders.

Arya Iranmehr, Tsering Stobdan, Dan Zhou, Orit Poulsen, Kingman P Strohl, Almaz Aldashev, Amalio Telenti, Emily H M Wong, Ewen F Kirkness, J Craig Venter and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
  3. Altitude hypoxia and hypoxemia: pathogenesis and management.Signal transduction and targeted therapy · 2026
    Review
  4. Mechanisms Underlying Altitude-Induced and Group 3 Pulmonary Hypertension.International journal of molecular sciences · 2026
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Arya IranmehrDepartment of Electrical & Computer Engineering, University of California, San Diego, La Jolla, CA, 92093, USA.
Tsering StobdanDivision of Respiratory Medicine, Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA.
Dan ZhouDivision of Respiratory Medicine, Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA.
Orit PoulsenDivision of Respiratory Medicine, Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA.
Kingman P StrohlDepartment of Medicine, University Hospitals Cleveland Medical Center, Cleveland, OH, USA.
Almaz AldashevNational Academy of Sciences, Bishkek, 720071, Kyrgyz Republic.
Amalio TelentiDepartment of Integrative Structural and Computational Biology, Scripps Research Institute, La Jolla, CA, 92037, USA.
Emily H M WongHuman Longevity Inc., San Diego, CA, 92121, USA.
Ewen F KirknessHuman Longevity Inc., San Diego, CA, 92121, USA.
J Craig VenterHuman Longevity Inc., San Diego, CA, 92121, USA.
Vineet BafnaDepartment of Computer Science & Engineering, University of California, San Diego, La Jolla, CA, 92093, USA.
Gabriel G HaddadDivision of Respiratory Medicine, Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA. ghaddad@ucsd.edu.
University of California, San Diego · USHuman Longevity (United States) · USNational Academy of Sciences of the Republic of Kyrgyzstan · KGScripps Research Institute · USUniversity Hospitals of Cleveland · US

Funding

Computational methods for detecting patterns of complex genomic variationR01GM114362 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Vineet Bafna · 2016 to 2026
$3.1M
Endothelin receptors modulate cardiorespiratory function during hypoxiaR01HL127403 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HADDAD, GABRIEL G · 2016 to 2019
$1.6M
Mechanisms Regulating Tolerance to Oxidative Stress in the BrainR21NS101652 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HADDAD, GABRIEL G · 2017 to 2018
$426k
NHLBI NIH HHS R01 HL127403NHLBI NIH HHS R01 HL127403-02NIGMS NIH HHS R01 GM114362NIGMS NIH HHS R01GM114362NINDS NIH HHS R21 NS101652NINDS NIH HHS R21NS101652-01
6 · The paper itself

Abstract

The Central Asian Kyrgyz highland population provides a unique opportunity to address genetic diversity and understand the genetic mechanisms underlying high-altitude pulmonary hypertension (HAPH). Although a significant fraction of the population is unaffected, there are susceptible individuals who display HAPH in the absence of any lung, cardiac or hematologic disease. We report herein the analysis of the whole-genome sequencing of healthy individuals compared with HAPH patients and other controls (total n = 33). Genome scans reveal selection signals in various regions, encompassing multiple genes from the first whole-genome sequences focusing on HAPH. We show here evidence of three candidate genes MTMR4, TMOD3 and VCAM1 that are functionally associated with well-known molecular and pathophysiological processes and which likely lead to HAPH in this population. These processes are (a) dysfunctional BMP signaling, (b) disrupted tissue repair processes and (c) abnormal endothelial cell function. Whole-genome sequence of well-characterized patients and controls and using multiple statistical tools uncovered novel candidate genes that belong to pathways central to the pathogenesis of HAPH. These studies on high-altitude human populations are pertinent to the understanding of sea level diseases involving hypoxia as a main element of their pathophysiology.

Indexed as

Polymorphism, GeneticAltitudeGenome-Wide Association StudyHumansHypertension, PulmonaryKyrgyzstanProtein Tyrosine Phosphatases, Non-ReceptorTropomodulinVascular Cell Adhesion Molecule-1MTMR4 protein, humanProtein Tyrosine Phosphatases, Non-ReceptorTMOD3 protein, humanTropomodulinVascular Cell Adhesion Molecule-1

Identifiers

PMID30254217
PMCPMC6303266
OpenAlexW2893833813

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.