Evidence map›Paper›PMID 30254072›Full record

ArticleThe Journal of biological chemistry2018

Insertion sequence 1 from calpain-3 is functional in calpain-2 as an internal propeptide.

Christian-Scott E McCartney, Qilu Ye, Robert L Campbell, Peter L Davies

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Novel mutations in theFrontiers in genetics · 2023
    Article
  4. Review
  5. The C2 domain of calpain 5 contributes to enzyme activation and membrane localization.Biochimica et biophysica acta. Molecular cell research · 2021
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Christian-Scott E McCartneyFrom the Department of Biomedical and Molecular Sciences, Queen's University, Kingston, Ontario K7L 3N6, Canada.
Qilu YeFrom the Department of Biomedical and Molecular Sciences, Queen's University, Kingston, Ontario K7L 3N6, Canada.
Robert L CampbellFrom the Department of Biomedical and Molecular Sciences, Queen's University, Kingston, Ontario K7L 3N6, Canada.
Peter L DaviesFrom the Department of Biomedical and Molecular Sciences, Queen's University, Kingston, Ontario K7L 3N6, Canada. Electronic address: daviesp@queensu.ca.
Queen's University · CA

Funding

CIHR MOP74681
6 · The paper itself

Abstract

Calpains are intracellular, calcium-activated cysteine proteases. Calpain-3 is abundant in skeletal muscle, where its mutation-induced loss of function causes limb-girdle muscular dystrophy type 2A. Unlike the small subunit-containing calpain-1 and -2, the calpain-3 isoform homodimerizes through pairing of its C-terminal penta-EF-hand domain. It also has two unique insertion sequences (ISs) not found in the other calpains: IS1 within calpain-3's protease core and IS2 just prior to the penta-EF-hand domain. Production of either native or recombinant full-length calpain-3 to characterize the function of these ISs is challenging. Therefore, here we used recombinant rat calpain-2 as a stable surrogate and inserted IS1 into its equivalent position in the protease core. As it does in calpain-3, IS1 occupied the catalytic cleft and restricted the enzyme's access to substrate and inhibitors. Following activation by Ca

Indexed as

DNA Transposable ElementsCalciumCalcium-Binding ProteinsCalpainCysteine Proteinase InhibitorsIsoenzymesLeucineLeupeptinsMuscle ProteinsProtein ConformationProteolysisRecombinant ProteinsCalciumCalcium-Binding ProteinsCalpaincalpastatinCapn2 protein, ratCapn3 protein, ratCysteine Proteinase InhibitorsDNA Transposable ElementsE 64IsoenzymesLeucineleupeptinLeupeptinsMuscle ProteinsRecombinant Proteinscalpaincalpain-2calpain-3/p94calpain inhibitorcalpastatincysteine proteaseinsertion sequence 1 (IS1)limb-girdle muscular dystrophymuscular dystrophyp94propeptideproteaseprotease inhibitorprotein engineeringstructure-function

Identifiers

PMID30254072
PMCPMC6240860
OpenAlexW2892959837

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.