Evidence map›Paper›PMID 30253813›Full record

ArticleInfection control and hospital epidemiology2018

Environmental transmission of Clostridioides difficile ribotype 027 at a long-term care facility; an outbreak investigation guided by whole genome sequencing.

Bradley T Endres, Kierra M Dotson, Kelley Poblete, Jacob McPherson, Chris Lancaster, Eugénie Bassères, Ali Memariani, Sandi Arnold, Shawn Tupy, Conner Carlsen and 6 more

Abstract read
In one paragraph

Article in Infection control and hospital epidemiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Reduced Vancomycin Susceptibility inOpen forum infectious diseases · 2024
    Article
  5. Review
  6. Infection control in long term care institutions for the elderly: A reflection document on the situation in Spain.Revista espanola de quimioterapia : publicacion oficial de la Sociedad Espanola de Quimioterapia · 2023
    Review
  7. Article
  8. Clinics in colon and rectal surgery · 2020
    Review
  9. PCR ribotypes ofEmerging microbes & infections · 2020
    Article
  10. Article
  11. EpidemicOpen forum infectious diseases · 2019
    Article
  12. Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Bradley T Endres1Department of Pharmacy Practice and Translational Research,University of Houston College of Pharmacy,Houston,Texas.
Kierra M Dotson1Department of Pharmacy Practice and Translational Research,University of Houston College of Pharmacy,Houston,Texas.
Kelley Poblete1Department of Pharmacy Practice and Translational Research,University of Houston College of Pharmacy,Houston,Texas.
Jacob McPherson1Department of Pharmacy Practice and Translational Research,University of Houston College of Pharmacy,Houston,Texas.
Chris Lancaster1Department of Pharmacy Practice and Translational Research,University of Houston College of Pharmacy,Houston,Texas.
Eugénie Bassères1Department of Pharmacy Practice and Translational Research,University of Houston College of Pharmacy,Houston,Texas.
Ali Memariani1Department of Pharmacy Practice and Translational Research,University of Houston College of Pharmacy,Houston,Texas.
Sandi Arnold2Texas Department of State Health Services,AustinTexas.
Shawn Tupy2Texas Department of State Health Services,AustinTexas.
Conner Carlsen2Texas Department of State Health Services,AustinTexas.
Bonnie Morehead2Texas Department of State Health Services,AustinTexas.
Sophia Anyatonwu2Texas Department of State Health Services,AustinTexas.
Christa Cook2Texas Department of State Health Services,AustinTexas.
Khurshida Begum1Department of Pharmacy Practice and Translational Research,University of Houston College of Pharmacy,Houston,Texas.
M Jahangir Alam1Department of Pharmacy Practice and Translational Research,University of Houston College of Pharmacy,Houston,Texas.
Kevin W Garey1Department of Pharmacy Practice and Translational Research,University of Houston College of Pharmacy,Houston,Texas.ORCID 0000-0003-2063-7503

Funding

Decoding Antibiotic-induced Susceptibility to Clostridium difficile InfectionU01AI124290 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI BRITTON, ROBERT A, GAREY, KEVIN W · 2016 to 2020
$7.9M
NIAID NIH HHS U01 AI124290
6 · The paper itself

Abstract

objectiveThis article describes a CDI outbreak in a long-term care (LTC) facility that used molecular typing techniques and whole-genome sequencing to identify widespread dissemination of the clonal strain in the environment which was successfully removed after terminal cleaning.

settingThis study was conducted in a long-term care facility in Texas.

methodsA recently hospitalized LTC patient was diagnosed with CDI followed shortly thereafter by 7 subsequent CDI cases. A stool specimen was obtained from each patient for culturing and typing. An environmental point-prevalence study of the facility was conducted before and after terminal cleaning of the facility to assess environmental contamination. Cultured isolates were typed using ribotyping, multilocus variant analysis, and whole-genome sequencing.

resultsStool samples were available for 5 of 8 patients; of these specimens, 4 grew toxigenic C. difficile ribotype 027. Of 50 environmental swab samples collected throughout the facility prior to the facility-wide terminal cleaning, 19 (38%) grew toxigenic C. difficile (most commonly ribotype 027, 79%). The terminal cleaning was effective at reducing C. difficile spores in the environment and at eradicating the ribotype 027 strain (P<.001). Using multilocus variance analysis and whole-genome sequencing, clinical and environmental strains were highly related and, in some cases, were identical.

conclusionUsing molecular typing techniques, we demonstrated reduced environmental contamination with toxigenic C. difficile and the eradication of a ribotype 027 clone. These techniques may help direct infection control efforts and decrease the burden of CDI in the healthcare system.

Indexed as

Whole Genome SequencingAnti-Bacterial AgentsClostridioides difficileClostridium InfectionsCross InfectionDiarrheaDisease OutbreaksFecesFemaleHumansLong-Term CareMaleMultilocus Sequence TypingRibotypingTexasAnti-Bacterial Agents

Identifiers

PMID30253813
PMCPMC6423542

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.