Evidence map›Paper›PMID 30253744›Full record

ArticleBMC cancer2018

Genetic variations in PRKAA1 predict the risk and progression of gastric Cancer.

Minbin Chen, Baohu Jiang, Bangshun He, Min Tang, Ping Wang, Li Chen, Jianwei Lu, Peihua Lu

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Genetic polymorphisms ofFrontiers in molecular neuroscience · 2023
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  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 1 country.

Minbin ChenDepartment of Radiotherapy & Oncology, Kunshan First People's Hospital Affiliated to Jiangsu University, Kunshan, Jiangsu Province, China.
Baohu JiangDepartment of Critical Care Medicine, The affiliated Yixing Hospital of Jiangsu University, Yixing, 214200, Jiangsu Province, China.
Bangshun HeGeneral Clinical Research center, Nanjing First Hospital, Nanjing Medical University, Nanjing, 220006, Jiangsu Province, China.ORCID http://orcid.org/0000-0002-4731-0167
Min TangDepartment of Radiotherapy & Oncology, Kunshan First People's Hospital Affiliated to Jiangsu University, Kunshan, Jiangsu Province, China.
Ping WangDepartments of Medical biology, Wannan Medical College, Wuhu, Anhui Province, China.
Li ChenDepartment of Gastroenterology, Xuzhou Hospital of Traditional Chinese Medicine Affiliated to Nanjing University of Chinese Medicine, Xuzhou, China.
Jianwei LuDepartments of Medical Oncology, Jiangsu Cancer Hospital Affiliated to Nanjing Medical University, Jiangsu Province Institute of Cancer, Nanjing, Jiangsu Province, China.
Peihua LuDepartment of Medical Oncology, Wuxi People's Hospital of Nanjing Medical University, No. 299, Qingyang Road, Wuxi, 214023, Jiangsu Province, China. lphty1_1@163.com.
Jiangsu University · CNJiangsu Cancer Hospital · CNNanjing Medical University · CNNanjing University of Chinese Medicine · CNWannan Medical College · CNWuxi No.2 People's Hospital · CN

Funding

National Natural Science Foundation 81472305National Natural Science Foundation 81472786Suzhou Municipal Health Bureau projects LCZX201318The Excellent Talent Foundation of Anhui Province 2012SQRL123The Foundation of tumor clinical and basic research team KYC005The Six Talents Peak Project of Jiangsu Province 2014-WSW-061
6 · The paper itself

Abstract

backgroundPRKAA1 encodes α-subunit of 5-AMP-activated protein kinase (AMPK), which has been implicated in the pathogenesis of carcinoma of the stomach. Previous works have suggested that polymorphisms in the PRKAA1 may be associated with the risk of non-cardiac gastric cancer (NCGC), but whether PRKAA1 polymorphisms are related to clinical pathologic characteristics of gastric cancer and its clinical outcome is largely unknown.

methodsWe carried out a case-control study including a total of 481 gastric cancer patients and 490 healthy controls. The genotypes of enrolled polymorphisms were identified with Sequenom MassARRAY platform.

resultsThis study showed that rs10074991 GG genotype (adjusted OR = 1.44, 95%CI:0.99-2.09, p = 0.056) has a borderline significantly increased risk for gastric cancer, which was consistent with the result of additive model (adjusted OR = 1.21, 95%CI:1.01-1.46, p = 0.042). In similar, an increased risk of gastric cancer was also observed for rs13361707 TC genotype (adjusted OR = 1.47, 95%CI: 1.01-2.14, p = 0.043; additive model: adjusted OR = 1.22, 95%CI: 1.02-1.47, p = 0.033). Furthermore, the rs154268 and rs461404 were also found associated with increased gastric cancer risk, which may be influenced by age, tumor type and differentiation, and tumor stage. Haplotype analysis indicated A-G-C-T-C-G haplotype (rs6882903, rs10074991, rs13361707, rs3805490, rs154268 and rs461404) is associated with increased risk of gastric cancer (OR = 1.29, 95%CI: 1.02-1.62, p = 0.035). The univariate analysis for overall survival (OS) revealed that both of rs10074991 and rs13361707 variants are associated with poor OS in patients with NCGC.

conclusionThis case-control study provided the evidence thatrs13361707CC, rs10074991GG, rs461404GG, and rs154268CC are associated with increased gastric cancer risk, especially for NCGC, and that patients with rs10074991 G or rs13361707 C allele have a poor OS.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseGenetic VariationAgedAllelesAMP-Activated Protein KinasesCase-Control StudiesDisease ProgressionFemaleGenotypeHaplotypesHumansLinkage DisequilibriumMaleMiddle AgedNeoplasm GradingAMP-Activated Protein KinasesPRKAA1 protein, humanGastric cancerPolymorphismPRKAA1Prognosis

Identifiers

PMID30253744
PMCPMC6156979
OpenAlexW2894454223

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.