Evidence map›Paper›PMID 30252567›Full record

ArticleCancer biology & therapy2019

Mutations of genes including DNMT3A detected by next-generation sequencing in thyroid cancer.

Ling-Chuan Guo, Wei-Dong Zhu, Xiang-Yuan Ma, Hao Ni, En-Jian Zhong, Yang W Shao, Jie Yu, Dong-Mei Gu, Shun-Dong Ji, Hao-Dong Xu and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer biology & therapy, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. NovelCancers · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Ling-Chuan Guo
Wei-Dong Zhua Department of Pathology , Hospital of Soochow University , Suzhou , China.
Xiang-Yuan Mab Translational Medicine Research Institution , Geneseeq Technology Inc ., Toronto , Ontario , Canada.
Hao Nia Department of Pathology , Hospital of Soochow University , Suzhou , China.
En-Jian Zhongc Department of Respiratory Medicine , Hospital of Soochow University , Suzhou , China.
Yang W Shaob Translational Medicine Research Institution , Geneseeq Technology Inc ., Toronto , Ontario , Canada.
Jie Yua Department of Pathology , Hospital of Soochow University , Suzhou , China.
Dong-Mei Gua Department of Pathology , Hospital of Soochow University , Suzhou , China.
Shun-Dong Jie MOH Key Laboratory of Thrombosis and Hemostasis, Collaborative Innovation Center of Hematology , Hospital of Soochow University, Jiangsu Institute of Hematology , Suzhou , China.
Hao-Dong Xuf Department of Pathology , University of Washington Medical Center , Seattle , WA , USA.
Cheng Jic Department of Respiratory Medicine , Hospital of Soochow University , Suzhou , China.
Jin-Ming Yangg Department of Pharmacology, the Penn State Cancer Institute , The Pennsylvania State University College of Medicine , Hershey , PA , USA.
Yi Zhangh Department of Pharmacology, College of Pharmaceutical Sciences , Soochow University , Suzhou , China.
Soochow University · CNNanjing Medical University · CNNational University · SDPennsylvania State University · USUniversity of Washington Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

More than 90% of thyroid cancer belongs to the papillary and follicular thyroid carcinomas based on pathological subtypes. Papillary and follicular thyroid carcinoma are generally associated with a good prognosis. In contrast, other pathological subtypes such as poorly-differentiated and anaplastic thyroid carcinoma (PDTC and ATC) have a poor clinical outcome with a short life expectancy. To identify the genetic variations and biomarkers that may potentially distinguish the aggressive form of thyroid cancer, we performed a retrospective analysis of the formalin-fixed paraffin-embedded tumor samples from 50 patients who mainly displayed aggressive thyroid cancer using next-generation sequencing of 416 solid tumor-related genes. We adopted extensive bioinformatic analysis to vigorously remove germline single-nucleotide polymorphism and systematic sequencing errors, and report here that mutation in DNMT3A gene was significantly enriched in patients with PDTC or ATC.

Indexed as

MutationDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3AFemaleHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedRetrospective StudiesThyroid Carcinoma, AnaplasticThyroid NeoplasmsDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3ADNMT3A protein, humangene mutationnext-generation sequencingthyroid carcinoma

Identifiers

PMID30252567
PMCPMC6370393
OpenAlexW2892395013

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.