Evidence map›Paper›PMID 30252496›Full record

ArticleAmerican journal of respiratory and critical care medicine2019

Xpert MTB/RIF Assay as a Substitute for Smear Microscopy in an Intermediate-Burden Setting.

Hyun-Seung Lee, Seung-Jung Kee, Ju-Hyeon Shin, Yong-Soo Kwon, Sejong Chun, Jun Hyung Lee, Eun Jeong Won, Hyun-Jung Choi, Soo Hyun Kim, Myung-Geun Shin and 2 more

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in American journal of respiratory and critical care medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

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  6. Correlation Between Xpert MTB/RIF Results andInfection and drug resistance · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Hyun-Seung Lee1 Department of Laboratory Medicine, Chonbuk National University Hospital, Jeonju, Republic of Korea.ORCID 0000-0003-4590-4989
Seung-Jung Kee2 Department of Laboratory Medicine and.ORCID 0000-0001-9708-5837
Ju-Hyeon Shin2 Department of Laboratory Medicine and.
Yong-Soo Kwon3 Department of Pulmonary and Critical Care Medicine, Chonnam National University Medical School and Hospital, Gwangju, Republic of Korea.ORCID 0000-0001-5121-4488
Sejong Chun2 Department of Laboratory Medicine and.ORCID 0000-0001-7462-5802
Jun Hyung Lee4 Department of Laboratory Medicine, Chonnam National University Medical School and Hwasun Hospital, Hwasun, Republic of Korea; and.ORCID 0000-0002-8682-3694
Eun Jeong Won2 Department of Laboratory Medicine and.ORCID 0000-0002-8750-4257
Hyun-Jung Choi4 Department of Laboratory Medicine, Chonnam National University Medical School and Hwasun Hospital, Hwasun, Republic of Korea; and.ORCID 0000-0003-2901-5962
Soo Hyun Kim4 Department of Laboratory Medicine, Chonnam National University Medical School and Hwasun Hospital, Hwasun, Republic of Korea; and.ORCID 0000-0001-9739-711X
Myung-Geun Shin4 Department of Laboratory Medicine, Chonnam National University Medical School and Hwasun Hospital, Hwasun, Republic of Korea; and.
Jong-Hee Shin2 Department of Laboratory Medicine and.
Soon-Pal Suh2 Department of Laboratory Medicine and.ORCID 0000-0002-1707-1898

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

rationaleUse of Xpert MTB/RIF assay as a substitute for smear microscopy in routine clinical practice remains unexplored in an intermediate-tuberculosis-burden setting.

objectivesTo compare the diagnostic performance of Xpert and smear microscopy, based on sampling time and location, correlation of Xpert semiquantitative category with smear grade and time to culture positivity, and compliance of reporting time with defined standard time.

methodsConsecutive sputum samples collected from 2,952 suspected pulmonary tuberculosis patients over a 3-year period were tested by Xpert, smear microscopy, and liquid culture as part of routine diagnostics in South Korea. MEASUREMENTS AND MAIN

resultsBased on the analysis of a single sputum specimen per patient, of 2,952 samples, 263 (8.9%) were culture-confirmed tuberculosis and 265 (9.0%) were nontuberculous mycobacteria. The overall sensitivity and specificity were 74.1% and 97.5% for Xpert versus 38.8% and 96.7% for smear microscopy, respectively (P < 0.0001; P > 0.05). Of 82 smear-positive nontuberculous mycobacteria, 81 (98.8%) were accurately excluded by Xpert. Sampling time and location significantly affected the performance of smear microscopy but not that of Xpert. Xpert semiquantitative category strongly correlated with smear grade (γ

conclusionsXpert provides faster, more stable, and superior results compared with smear microscopy, in addition to its strong correlation with smear grade. Xpert might replace smear microscopy as the first-line diagnostic test for pulmonary tuberculosis in routine clinical practice in an intermediate-burden setting.

Indexed as

Molecular Diagnostic TechniquesHumansMicroscopyMycobacterium tuberculosisRepublic of KoreaSensitivity and SpecificitySputumTuberculosis, Pulmonarydiagnostic performancereporting timesmear microscopytuberculosisXpert MTB/RIF

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.