Evidence map›Paper›PMID 30252461›Full record

ArticleJournal of the American Chemical Society2018

A Chemical Signature for Cytidine Acetylation in RNA.

Justin M Thomas, Chloe A Briney, Kellie D Nance, Jeffrey E Lopez, Abigail L Thorpe, Stephen D Fox, Marie-Line Bortolin-Cavaille, Aldema Sas-Chen, Daniel Arango, Shalini Oberdoerffer and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 131 citations in OpenAlex.

  1. Article
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  11. Review
  12. Review
  13. NAT10 andScience advances · 2025
    Article
  14. Article
  15. A sequence-specific RNA acetylation catalyst.Nucleic acids research · 2025
    Article
  16. NAT10-mediated mRNAScience advances · 2025
    Article
  17. Review
  18. Review
  19. Article
  20. Review

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Justin M ThomasChemical Biology Laboratory , National Cancer Institute , Frederick , Maryland 21702 , United States.
Chloe A BrineyChemical Biology Laboratory , National Cancer Institute , Frederick , Maryland 21702 , United States.
Kellie D NanceChemical Biology Laboratory , National Cancer Institute , Frederick , Maryland 21702 , United States.ORCID 0000-0002-4396-9124
Jeffrey E LopezChemical Biology Laboratory , National Cancer Institute , Frederick , Maryland 21702 , United States.ORCID 0000-0002-5329-0043
Abigail L ThorpeChemical Biology Laboratory , National Cancer Institute , Frederick , Maryland 21702 , United States.
Stephen D FoxProtein Characterization Laboratory , Frederick National Laboratory for Cancer Research , Frederick , Maryland 21701 , United States.
Marie-Line Bortolin-CavailleLaboratoire de Biologie Moléculaire Eucaryote , Toulouse 31062 , France.
Aldema Sas-ChenDepartment of Molecular Genetics , Weizmann Institute of Science , Rehovot 7610001 , Israel.
Daniel ArangoLaboratory of Receptor Biology and Gene Expression , National Cancer Institute , Bethesda , Maryland 20892 , United States.ORCID 0000-0001-9523-830X
Shalini OberdoerfferLaboratory of Receptor Biology and Gene Expression , National Cancer Institute , Bethesda , Maryland 20892 , United States.
Jerome CavailleLaboratoire de Biologie Moléculaire Eucaryote , Toulouse 31062 , France.
Thorkell AndressonProtein Characterization Laboratory , Frederick National Laboratory for Cancer Research , Frederick , Maryland 21701 , United States.
Jordan L MeierChemical Biology Laboratory , National Cancer Institute , Frederick , Maryland 21702 , United States.ORCID 0000-0002-0537-7101
Frederick National Laboratory for Cancer Research · USLaboratoire de Biologie Moléculaire des Eucaryotes · FRNational Cancer Institute · USWeizmann Institute of Science · IL

Funding

Targeting Cancer Through Modifications and MetabolismZIABC011488 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MEIER, JORDAN L · 2013 to 2025
$21.3M
CCR NIH HHS HHSN261200800001CIntramural NIH HHS ZIA BC011488NCI NIH HHS HHSN261200800001ENCI NIH HHS ZIA BC011488
6 · The paper itself

Abstract

N4-acetylcytidine (ac4C) is a highly conserved modified RNA nucleobase whose formation is catalyzed by the disease-associated N-acetyltransferase 10 (NAT10). Here we report a sensitive chemical method to localize ac4C in RNA. Specifically, we characterize the susceptibility of ac4C to borohydride-based reduction and show this reaction can cause introduction of noncognate base pairs during reverse transcription (RT). Combining borohydride-dependent misincorporation with ac4C's known base-sensitivity provides a unique chemical signature for this modified nucleobase. We show this unique reactivity can be used to quantitatively analyze cellular RNA acetylation, study adapters responsible for ac4C targeting, and probe the timing of RNA acetylation during ribosome biogenesis. Overall, our studies provide a chemical foundation for defining an expanding landscape of cytidine acetyltransferase activity and its impact on biology and disease.

Indexed as

AcetylationBase SequenceCytidineHumansNucleic Acid ConformationOxidation-ReductionRNARNA, RibosomalCytidineN-acetylcytidineRNARNA, Ribosomal

Identifiers

PMID30252461
PMCPMC8054311
OpenAlexW2894397610

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.