Evidence map›Paper›PMID 30252144›Full record

ArticleThe New phytologist2019

Comparing Arabidopsis receptor kinase and receptor protein-mediated immune signaling reveals BIK1-dependent differences.

Wei-Lin Wan, Lisha Zhang, Rory Pruitt, Maricris Zaidem, Rik Brugman, Xiyu Ma, Elzbieta Krol, Artemis Perraki, Joachim Kilian, Guido Grossmann and 8 more

Open access · hybridAbstract readComparative Study
In one paragraph

Article in The New phytologist, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
16.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 101 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 10 institutions in 6 countries.

Wei-Lin WanDepartment of Plant Biochemistry, Centre for Plant Molecular Biology, Eberhard Karls University Tübingen, Auf der Morgenstelle 32, D-72076, Tübingen, Germany.ORCID 0000-0002-2062-8466
Lisha ZhangDepartment of Plant Biochemistry, Centre for Plant Molecular Biology, Eberhard Karls University Tübingen, Auf der Morgenstelle 32, D-72076, Tübingen, Germany.
Rory PruittDepartment of Plant Biochemistry, Centre for Plant Molecular Biology, Eberhard Karls University Tübingen, Auf der Morgenstelle 32, D-72076, Tübingen, Germany.
Maricris ZaidemDepartment of Molecular Biology, Max-Planck-Institute for Developmental Biology, Max-Planck-Str. 5, D-72076, Tübingen, Germany.ORCID 0000-0002-1913-6771
Rik BrugmanCentre for Organismal Studies & Excellence Cluster Cell Networks, Heidelberg University, Im Neuenheimer Feld 230, 69120, Heidelberg, Germany.
Xiyu MaInstitute for Plant Genomics & Biotechnology, Texas A&M University, College Station, TX, 77843, USA.
Elzbieta KrolPlant Physiology and Biophysics, Julius Maximilians University Würzburg, Julius-von-Sachs-Platz 2, 97082, Würzburg, Germany.
Artemis PerrakiThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, UK.
Joachim KilianAnalytics Unit, Centre for Plant Molecular Biology, Eberhard Karls University Tübingen, Auf der Morgenstelle 32, D-72076, Tübingen, Germany.ORCID 0000-0001-5711-3688
Guido GrossmannCentre for Organismal Studies & Excellence Cluster Cell Networks, Heidelberg University, Im Neuenheimer Feld 230, 69120, Heidelberg, Germany.ORCID 0000-0001-7529-9244
Mark StahlAnalytics Unit, Centre for Plant Molecular Biology, Eberhard Karls University Tübingen, Auf der Morgenstelle 32, D-72076, Tübingen, Germany.ORCID 0000-0002-1139-4178
Libo ShanInstitute for Plant Genomics & Biotechnology, Texas A&M University, College Station, TX, 77843, USA.
Cyril ZipfelThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0003-4935-8583
Jan A L van KanLaboratory of Phytopathology, Wageningen University, 6708 PB, Wageningen, the Netherlands.ORCID 0000-0003-3563-1550
Rainer HedrichPlant Physiology and Biophysics, Julius Maximilians University Würzburg, Julius-von-Sachs-Platz 2, 97082, Würzburg, Germany.ORCID 0000-0003-3224-1362
Detlef WeigelDepartment of Molecular Biology, Max-Planck-Institute for Developmental Biology, Max-Planck-Str. 5, D-72076, Tübingen, Germany.ORCID 0000-0002-2114-7963
Andrea A GustDepartment of Plant Biochemistry, Centre for Plant Molecular Biology, Eberhard Karls University Tübingen, Auf der Morgenstelle 32, D-72076, Tübingen, Germany.ORCID 0000-0003-0466-2792
Thorsten NürnbergerDepartment of Plant Biochemistry, Centre for Plant Molecular Biology, Eberhard Karls University Tübingen, Auf der Morgenstelle 32, D-72076, Tübingen, Germany.ORCID 0000-0003-3992-0149
University of Tübingen · DEHeidelberg University · DEMax Planck Institute for Developmental Biology · DETexas A&M University · USMaria Curie-Skłodowska University · PLNorwich Research Park · GBUniversity of Cambridge · GBUniversity of Johannesburg · ZAUniversity of Würzburg · DEWageningen University & Research · NL

Funding

Phosphorylation and ubiquitination of immune sensory complexes in innate immune signalingR01GM097247 · NIGMS · TEXAS A&M UNIVERSITY · PI SHAN, LIBO · 2011 to 2021
$2.4M
Cell Networks research group fundsDeutsche Forschungsgemeinschaft Gu1034/3-1Deutsche Forschungsgemeinschaft Nu70/15-1Deutsche Forschungsgemeinschaft SFB1101European Research CouncilFrontier grant from Heidelberg UniversityGatsby Charitable FoundationMax-Planck-GesellschaftNHI R01GM097247NIGMS NIH HHS R01 GM097247Robert A. Welch foundation A-1795
6 · The paper itself

Abstract

Pattern recognition receptors (PRRs) sense microbial patterns and activate innate immunity against attempted microbial invasions. The leucine-rich repeat receptor kinases (LRR-RK) FLS2 and EFR, and the LRR receptor protein (LRR-RP) receptors RLP23 and RLP42, respectively, represent prototypical members of these two prominent and closely related PRR families. We conducted a survey of Arabidopsis thaliana immune signaling mediated by these receptors to address the question of commonalities and differences between LRR-RK and LRR-RP signaling. Quantitative differences in timing and amplitude were observed for several early immune responses, with RP-mediated responses typically being slower and more prolonged than those mediated by RKs. Activation of RLP23, but not FLS2, induced the production of camalexin. Transcriptomic analysis revealed that RLP23-regulated genes represent only a fraction of those genes differentially expressed upon FLS2 activation. Several positive and negative regulators of FLS2-signaling play similar roles in RLP23 signaling. Intriguingly, the cytoplasmic receptor kinase BIK1, a positive regulator of RK signaling, acts as a negative regulator of RP-type immune receptors in a manner dependent on BIK1 kinase activity. Our study unveiled unexpected differences in two closely related receptor systems and reports a new negative role of BIK1 in plant immunity.

Indexed as

Plant ImmunitySignal TransductionArabidopsis ProteinsFlagellinGenotypePeptidesPhosphorylationPhytoalexinsPlant Growth RegulatorsProtein KinasesProtein Serine-Threonine KinasesReactive Oxygen SpeciesReceptors, Pattern RecognitionSalicylic AcidSesquiterpenesTranscription, GeneticArabidopsis ProteinsBIK1 protein, ArabidopsisFlagellinPeptidesPhytoalexinsPlant Growth RegulatorsProtein KinasesProtein Serine-Threonine KinasesReactive Oxygen SpeciesReceptors, Pattern RecognitionSalicylic AcidSesquiterpenesArabidopsisimmune receptorimmune signaling comparisonplant immunityreceptor kinasereceptor protein

Identifiers

PMID30252144
PMCPMC6367016
OpenAlexW2894308419

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.