Evidence map›Paper›PMID 30251626›Full record

ArticleeLife2018

Specific structural elements of the T-box riboswitch drive the two-step binding of the tRNA ligand.

Jiacheng Zhang, Bhaskar Chetnani, Eric D Cormack, Dulce Alonso, Wei Liu, Alfonso Mondragón, Jingyi Fei

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
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  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Incorporation of a FRET Pair into a Riboswitch RNA to Measure MgInternational journal of molecular sciences · 2022
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Intermolecular Communication inFrontiers in molecular biosciences · 2020
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jiacheng Zhang *Institute for Biophysical Dynamics, University of Chicago, Chicago, United States.ORCID http://orcid.org/0000-0002-8671-5888
Bhaskar Chetnani *Department of Molecular Biosciences, Northwestern University, Evanston, United States.
Eric D CormackUniversity of Chicago College, Chicago, United States.
Dulce AlonsoDepartment of Molecular Biosciences, Northwestern University, Evanston, United States.
Wei LiuDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, United States.
Alfonso MondragónDepartment of Molecular Biosciences, Northwestern University, Evanston, United States.ORCID https://orcid.org/0000-0002-0423-6323
Jingyi FeiInstitute for Biophysical Dynamics, University of Chicago, Chicago, United States.ORCID http://orcid.org/0000-0002-9775-3820
University of Chicago · USNorthwestern University · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LEONIDAS C. PLATANIAS · 1993 to 2026
$153.9M
Structural and biophysical studies of proteins, nucleic acids, and their complexesR35GM118108 · NIGMS · NORTHWESTERN UNIVERSITY · PI Alfonso Mondragon · 2017 to 2026
$5.4M
NCI NIH HHS P30 CA060553NIGMS NIH HHS R35 GM118108
6 · The paper itself

Abstract

T-box riboswitches are

Indexed as

Amino AcidsAnticodonBacillus subtilisBinding SitesGenes, RegulatorKineticsLigandsNucleic Acid ConformationRiboswitchRNA, TransferAmino AcidsAnticodonLigandsRiboswitchRNA, TransferB. subtilisgene regulationmolecular biophysicsriboswitchsmFRETstructural biologyT-box

Identifiers

PMID30251626
PMCPMC6197855
OpenAlexW2893189577

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.