Evidence map›Paper›PMID 30251130›Full record

ArticleJournal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry2018

Spectroscopic evidence supporting neutral thiol ligation to ferrous heme iron.

Masanori Sono, Shengfang Sun, Anuja Modi, Mark S Hargrove, Bastian Molitor, Nicole Frankenberg-Dinkel, John H Dawson

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Alison Butler: papers in celebration of her 2018 ACS Alfred Bader Award in Bioorganic or Bioinorganic Chemistry.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2021
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Masanori SonoDepartment of Chemistry and Biochemistry, University of South Carolina, Columbia, SC, 29208, USA. msono@mailbox.sc.edu.
Shengfang SunDepartment of Chemistry and Biochemistry, University of South Carolina, Columbia, SC, 29208, USA.
Anuja ModiDepartment of Chemistry and Biochemistry, University of South Carolina, Columbia, SC, 29208, USA.
Mark S HargroveRoy J. Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, Ames, IA, 50011, USA.
Bastian MolitorCenter for Applied Geosciences, University of Tübingen, Hölderlinstr. 12, 72074, Tübingen, Germany.
Nicole Frankenberg-DinkelTechnische Universität Kaiserslautern, Fachbereich Biologie, Abt. Mikrobiologie, Erwin-Schrödinger-Straße 56, 67663, Kaiserslautern, Germany.
John H DawsonDepartment of Chemistry and Biochemistry, University of South Carolina, Columbia, SC, 29208, USA. jdawson@mailbox.sc.edu.
University of South Carolina · USIowa State University · USUniversity of Kaiserslautern · DEUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The binding of neutral thiol (ethanethiol, EtSH) or thioether (tetrahydrothiophene, THT) to two types of heme proteins in their ferrous state has been investigated with UV-visible (UV-Vis) absorption and magnetic circular dichroism spectroscopy. For the second GAF (cGMP-specific phosphodiesterases, adenylyl cyclases, and FhlA) domain from the sensory kinase MsmS (sGAF2), stepwise additions of these respective two sulfur-donor ligands to its dithionite-reduced ferrous form generate homogeneous six-coordinate low-spin ferrous complexes at both pHs 7.0 and 5.4. Similar complexes were partially formed for deoxyferrous soybean leghemoglobin with EtSH or THT within their solubility limits in water. The titrations cause significant UV-Vis spectra changes attributable to a five-coordinate to six-coordinate heme iron coordination change. For sGAF2, the resulting spectra are essentially identical for the both ligands, clearly indicating the direct binding of neutral thiol/thioether to ferrous heme iron as the distal ligand. On the other hand, the thiol EtSH binds to ferric sGAF2 in the anionic thiolate form, while thioether THT forms its ferric sGAF2 complex as a neutral ligand. These observations provide compelling evidence that neutral cysteine is a plausible ligand for ferrous heme proteins.

Indexed as

Coordination ComplexesFerrous CompoundsHemeLigandsMolecular StructureSpectrophotometry, UltravioletSulfhydryl CompoundsCoordination ComplexesFerrous CompoundsHemeLigandsSulfhydryl CompoundsMagnetic circular dichroism spectroscopySensory kinase MsmSSoybean leghemoglobinThe second GAF domain (sGAF2)Thiols as heme axial ligands

Identifiers

PMID30251130
OpenAlexW2893948779

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.