Evidence map›Paper›PMID 30250128›Full record

ArticleNature genetics2018

Parallel selection on a dormancy gene during domestication of crops from multiple families.

Min Wang, Wenzhen Li, Chao Fang, Fan Xu, Yucheng Liu, Zheng Wang, Rui Yang, Min Zhang, Shulin Liu, Sijia Lu and 13 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 118 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
118citing papers in PubMed, 2 pooled it
38.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

118 citing papers in PubMed, 2 syntheses or guidelines pooled it, 261 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. International journal of molecular sciences · 2026
    Article
  4. SDR3.1 negatively regulates seed dormancy in Poaceae crops.The Plant journal : for cell and molecular biology · 2026
    Article
  5. Article
  6. Convergence and parallelism in the evolution of plant metabolism.Journal of integrative plant biology · 2026
    Review
  7. Article
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  10. Review
  11. Review
  12. A natural allele ofProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Harnessing neo-domestication of wild pigmented rice for enhanced nutrition and sustainable agriculture.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Review
  18. Article
  19. Article
  20. Knocking out artificially selected gene GmAOC4TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article

58 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors at 3 institutions in 2 countries.

Min WangState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Wenzhen LiUniversity of Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0002-0839-509X
Chao FangState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Fan XuUniversity of Chinese Academy of Sciences, Beijing, China.
Yucheng LiuState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Zheng WangState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Rui YangState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Min ZhangState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Shulin LiuState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Sijia LuSchool of Life Sciences, Guangzhou University, Guangzhou, China.
Tao LinState Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Jiuyou TangState Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0002-9059-2139
Yiqin WangState Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Hongru WangState Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Hao LinBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.
Baoge ZhuState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Mingsheng ChenUniversity of Chinese Academy of Sciences, Beijing, China.
Fanjiang KongSchool of Life Sciences, Guangzhou University, Guangzhou, China.
Baohui LiuSchool of Life Sciences, Guangzhou University, Guangzhou, China.
Dali ZengState Key Laboratory of Rice Biology, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, China.
Scott A JacksonCenter for Applied Genetic Technologies, Department of Crop and Soil Sciences, University of Georgia, Athens, GA, USA. sjackson@uga.edu.ORCID http://orcid.org/0000-0002-3172-1607
Chengcai ChuUniversity of Chinese Academy of Sciences, Beijing, China. ccchu@genetics.ac.cn.ORCID http://orcid.org/0000-0001-8097-6115
Zhixi TianState Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China. zxtian@genetics.ac.cn.ORCID http://orcid.org/0000-0001-6051-9670
Chinese Academy of Sciences · CNChinese Academy of Agricultural Sciences · CNUniversity of Georgia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Domesticated species often exhibit convergent phenotypic evolution, termed the domestication syndrome, of which loss of seed dormancy is a component. To date, dormancy genes that contribute to parallel domestication across different families have not been reported. Here, we cloned the classical stay-green G gene from soybean and found that it controls seed dormancy and showed evidence of selection during soybean domestication. Moreover, orthologs in rice and tomato also showed evidence of selection during domestication. Analysis of transgenic plants confirmed that orthologs of G had conserved functions in controlling seed dormancy in soybean, rice, and Arabidopsis. Functional investigation demonstrated that G affected seed dormancy through interactions with NCED3 and PSY and in turn modulated abscisic acid synthesis. Therefore, we identified a gene responsible for seed dormancy that has been subject to parallel selection in multiple crop families. This may help facilitate the domestication of new crops.

Indexed as

DomesticationSelection, GeneticAgricultureArabidopsisCrops, AgriculturalGlycine maxOryzaPlant BreedingPlant DevelopmentPlant DormancyPlants, Genetically ModifiedSeedsSequence HomologySolanum lycopersicum

Identifiers

PMID30250128
OpenAlexW2890283234

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.