Evidence map›Paper›PMID 30249287›Full record

ArticleVirology journal2018

The complete genomic sequence of Sugarcane mosaic virus from Canna spp. in China.

W Tang, Z-Y Yan, T-S Zhu, X-J Xu, X-D Li, Y-P Tian

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Article in Virology journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

W TangShandong Province Key Laboratory of Agricultural Microbiology, Department of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, Shandong, 271018, People's Republic of China.
Z-Y YanShandong Province Key Laboratory of Agricultural Microbiology, Department of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, Shandong, 271018, People's Republic of China.
T-S ZhuShandong Province Key Laboratory of Agricultural Microbiology, Department of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, Shandong, 271018, People's Republic of China.
X-J XuShandong Province Key Laboratory of Agricultural Microbiology, Department of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, Shandong, 271018, People's Republic of China.
X-D LiShandong Province Key Laboratory of Agricultural Microbiology, Department of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, Shandong, 271018, People's Republic of China. xdongli@sdau.edu.cn.ORCID 0000-0001-9838-0045
Y-P TianShandong Province Key Laboratory of Agricultural Microbiology, Department of Plant Pathology, College of Plant Protection, Shandong Agricultural University, Tai'an, Shandong, 271018, People's Republic of China. yanping.tian@sdau.edu.cn.

Funding

National Key Research and Development Program 2018YFD0200604Shandong 'Double Top' Program SYL2017XTTD11Shandong Modern Agricultural Technology & Industry System SDAIT-02-10'Taishan Scholar' Construction Project TS201712023
6 · The paper itself

Abstract

backgroundSugarcane mosaic virus (SCMV) is the prevalent virus inducing maize dwarf mosaic and sugarcane mosaic diseases in China. According to the phylogenetic results of the complete genomic and coat protein gene sequences, SCMV was divided into four or five molecular groups, respectively. Previously, we detected SCMV isolates of group SO from Canna spp. in Ji'nan, Shandong province, China.

findingsIn this study, we collected two SCMV isolates infecting Canna spp. in Ji'nan (Canna-Ji'nan) and Tai'an (Canna-Tai'an) of Shandong, China. Their complete genome sequences had genome of 9576 nucleotides and contained a large open reading frame encoding a polyprotein of 3063 amino acids. The phylogenetic analysis showed that the both Canna-Ji'nan and Canna-Tai'an were clustered into an independent group based on the complete genome sequence.

conclusionIn this study, we report the complete genome sequences of SCMV infecting Canna spp. from Ji'nan and Tai'an. This is the first report on SCMV belonging to SO group.

Indexed as

Genome, ViralSequence Analysis, DNAChinaCluster AnalysisOpen Reading FramesPhylogenyPlant DiseasesPolyproteinsPotyvirusSequence HomologyViral ProteinsZingiberalesPolyproteinsViral ProteinsCanna spp.Complete genomePhylogenetic analysisSCMV

Identifiers

PMID30249287
PMCPMC6154414

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.