Evidence map›Paper›PMID 30247619›Full record

ArticleNucleic acids research2018

Cdk1 gates cell cycle-dependent tRNA synthesis by regulating RNA polymerase III activity.

Maria C Herrera, Pierre Chymkowitch, Joseph M Robertson, Jens Eriksson, Stig Ove Bøe, Ingrun Alseth, Jorrit M Enserink

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 32 citations in OpenAlex.

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  8. Regulation of Eukaryotic RNAPs Activities by Phosphorylation.Frontiers in molecular biosciences · 2021
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  18. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Maria C HerreraDepartment of Molecular Cell Biology, Institute for Cancer Research, the Norwegian Radium Hospital, Montebello, N-0379 Oslo, Norway.
Pierre ChymkowitchDepartment of Molecular Cell Biology, Institute for Cancer Research, the Norwegian Radium Hospital, Montebello, N-0379 Oslo, Norway.
Joseph M RobertsonDepartment of Molecular Cell Biology, Institute for Cancer Research, the Norwegian Radium Hospital, Montebello, N-0379 Oslo, Norway.
Jens ErikssonDepartment of Medical Biochemistry, Oslo University Hospital, Oslo, Norway.
Stig Ove BøeDepartment of Medical Biochemistry, Oslo University Hospital, Oslo, Norway.
Ingrun AlsethDepartment of Microbiology, Oslo University Hospital, Oslo, Norway.
Jorrit M EnserinkDepartment of Molecular Cell Biology, Institute for Cancer Research, the Norwegian Radium Hospital, Montebello, N-0379 Oslo, Norway.
Oslo University Hospital · NOUniversity of Oslo · NONorwegian Cancer Society · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

tRNA genes are transcribed by RNA polymerase III (RNAPIII). During recent years it has become clear that RNAPIII activity is strictly regulated by the cell in response to environmental cues and the homeostatic status of the cell. However, the molecular mechanisms that control RNAPIII activity to regulate the amplitude of tDNA transcription in normally cycling cells are not well understood. Here, we show that tRNA levels fluctuate during the cell cycle and reveal an underlying molecular mechanism. The cyclin Clb5 recruits the cyclin dependent kinase Cdk1 to tRNA genes to boost tDNA transcription during late S phase. At tDNA genes, Cdk1 promotes the recruitment of TFIIIC, stimulates the interaction between TFIIIB and TFIIIC, and increases the dynamics of RNA polymerase III in vivo. Furthermore, we identified Bdp1 as a putative Cdk1 substrate in this process. Preventing Bdp1 phosphorylation prevented cell cycle-dependent recruitment of TFIIIC and abolished the cell cycle-dependent increase in tDNA transcription. Our findings demonstrate that under optimal growth conditions Cdk1 gates tRNA synthesis in S phase by regulating the RNAPIII machinery, revealing a direct link between the cell cycle and RNAPIII activity.

Indexed as

CDC28 Protein Kinase, S cerevisiaeCDC2 Protein KinaseCell CycleCyclin BGene Expression ProfilingGene Expression Regulation, FungalPhosphorylationProtein BindingRNA Polymerase IIIRNA, TransferSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsS PhaseTranscription Factors, TFIIITranscription Factor TFIIIBTranscription Factor TFIIICBdp1 protein, S cerevisiaeCDC28 Protein Kinase, S cerevisiaeCDC2 Protein KinaseCLB5 protein, S cerevisiaeCyclin BRNA Polymerase IIIRNA, TransferSaccharomyces cerevisiae ProteinsTranscription Factors, TFIIITranscription Factor TFIIIBTranscription Factor TFIIIC

Identifiers

PMID30247619
PMCPMC6294503
OpenAlexW2894390819

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.