Evidence map›Paper›PMID 30242946›Full record

ArticleMolecular plant pathology2019

Structural and functional insights into the modulation of the activity of a flax cytokinin oxidase by flax rust effector AvrL567-A.

Li Wan, Markus Koeck, Simon J Williams, Anthony R Ashton, Gregory J Lawrence, Hitoshi Sakakibara, Mikiko Kojima, Christine Böttcher, Daniel J Ericsson, Adrienne R Hardham and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular plant pathology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
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  9. Article
  10. Candidate Effectors FromFrontiers in plant science · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Li WanSchool of Chemistry and Molecular Biosciences, Australian Infectious Diseases Research Centre and Institute for Molecular Bioscience, University of Queensland, Brisbane, QLD, 4072, Australia.ORCID 0000-0002-0839-3748
Markus KoeckCommonwealth Scientific and Industrial Research Organisation Agriculture and Food, Canberra, ACT, 2601, Australia.
Simon J WilliamsSchool of Chemistry and Molecular Biosciences, Australian Infectious Diseases Research Centre and Institute for Molecular Bioscience, University of Queensland, Brisbane, QLD, 4072, Australia.
Anthony R AshtonCommonwealth Scientific and Industrial Research Organisation Agriculture and Food, Canberra, ACT, 2601, Australia.
Gregory J LawrenceCommonwealth Scientific and Industrial Research Organisation Agriculture and Food, Canberra, ACT, 2601, Australia.
Hitoshi SakakibaraRIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045, Japan.
Mikiko KojimaRIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045, Japan.
Christine BöttcherCommonwealth Scientific and Industrial Research Organisation Agriculture and Food, Adelaide, SA, 5064, Australia.
Daniel J EricssonAustralian Synchrotron, Macromolecular Crystallography, Clayton, Victoria, 3168, Australia.
Adrienne R HardhamDivision of Plant Sciences, Research School of Biology, Australian National University, Canberra, ACT, 2601, Australia.
David A JonesDivision of Plant Sciences, Research School of Biology, Australian National University, Canberra, ACT, 2601, Australia.
Jeffrey G EllisCommonwealth Scientific and Industrial Research Organisation Agriculture and Food, Canberra, ACT, 2601, Australia.
Bostjan KobeSchool of Chemistry and Molecular Biosciences, Australian Infectious Diseases Research Centre and Institute for Molecular Bioscience, University of Queensland, Brisbane, QLD, 4072, Australia.
Peter N DoddsCommonwealth Scientific and Industrial Research Organisation Agriculture and Food, Canberra, ACT, 2601, Australia.
Commonwealth Scientific and Industrial Research Organisation · AUAustralian National University · AURIKEN Center for Sustainable Resource Science · JPAustralian Synchrotron · AUThe University of Queensland · AUUniversity of North Carolina at Chapel Hill · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During infection, plant pathogens secrete effector proteins to facilitate colonization. In comparison with our knowledge of bacterial effectors, the current understanding of how fungal effectors function is limited. In this study, we show that the effector AvrL567-A from the flax rust fungus Melampsora lini interacts with a flax cytosolic cytokinin oxidase, LuCKX1.1, using both yeast two-hybrid and in planta bimolecular fluorescence assays. Purified LuCKX1.1 protein shows catalytic activity against both N6-(Δ2-isopentenyl)-adenine (2iP) and trans-zeatin (tZ) substrates. Incubation of LuCKX1.1 with AvrL567-A results in increased catalytic activity against both substrates. The crystal structure of LuCKX1.1 and docking studies with AvrL567-A indicate that the AvrL567 binding site involves a flexible surface-exposed region that surrounds the cytokinin substrate access site, which may explain its effect in modulating LuCKX1.1 activity. Expression of AvrL567-A in transgenic flax plants gave rise to an epinastic leaf phenotype consistent with hormonal effects, although no difference in overall cytokinin levels was observed. We propose that, during infection, plant pathogens may differentially modify the levels of extracellular and intracellular cytokinins.

Indexed as

BasidiomycotaFlaxFungal ProteinsOxidoreductasesPlant DiseasesPlant ProteinsProtein BindingTwo-Hybrid System Techniquescytokinin oxidaseFungal ProteinsOxidoreductasesPlant Proteinscrystal structurecytokinincytokinin oxidaseflax rust (Melampsora lini) effectorpathogen virulence

Identifiers

PMID30242946
PMCPMC6637871
OpenAlexW2893386159

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.