Evidence map›Paper›PMID 30242285›Full record

ArticleScientific reports2018

Commensal microbiota induces colonic barrier structure and functions that contribute to homeostasis.

Christina L Hayes, Jasmine Dong, Heather J Galipeau, Jennifer Jury, Justin McCarville, Xianxi Huang, Xuan-Yu Wang, Avee Naidoo, Arivarasu N Anbazhagan, Josie Libertucci and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed, 1 pooled it
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 1 synthesis or guideline pooled it, 195 citations in OpenAlex.

  1. Roles of the gut microbiome in weight management.Nature reviews. Microbiology · 2023
    Pooled it
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Proteases and Abdominal Pain-Old Dog, New (Microbial) Tricks.Cellular and molecular gastroenterology and hepatology · 2026
    Review
  12. Article
  13. Article
  14. The gut microbiota in thrombosis.Nature reviews. Cardiology · 2025
    Review
  15. Review
  16. Article
  17. The expression of intestinal Cyp2c55 is regulated by the microbiota and inflammation.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2024
    Article
  18. Bacteria and Allergic Diseases.International journal of molecular sciences · 2024
    Review
  19. Article
  20. Research progress on intestinal microbiota regulating cognitive function through the gut-brain axis.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2024
    Review

40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Christina L HayesFarncombe Family Digestive Health Research Institute, McMaster University, Hamilton, Ontario, Canada.
Jasmine DongFarncombe Family Digestive Health Research Institute, McMaster University, Hamilton, Ontario, Canada.
Heather J GalipeauFarncombe Family Digestive Health Research Institute, McMaster University, Hamilton, Ontario, Canada.
Jennifer JuryFarncombe Family Digestive Health Research Institute, McMaster University, Hamilton, Ontario, Canada.
Justin McCarvilleFarncombe Family Digestive Health Research Institute, McMaster University, Hamilton, Ontario, Canada.
Xianxi HuangFarncombe Family Digestive Health Research Institute, McMaster University, Hamilton, Ontario, Canada.
Xuan-Yu WangFarncombe Family Digestive Health Research Institute, McMaster University, Hamilton, Ontario, Canada.
Avee NaidooDepartment of Pathology and Molecular Medicine, McMaster University, Hamilton, Ontario, Canada.
Arivarasu N AnbazhaganDivision of Gastroenterology and Hepatology, Department of Medicine, University of Illinois at Chicago, Chicago, Illinois, USA.
Josie LibertucciFarncombe Family Digestive Health Research Institute, McMaster University, Hamilton, Ontario, Canada.
Conor SheridanFarncombe Family Digestive Health Research Institute, McMaster University, Hamilton, Ontario, Canada.
Pradeep K DudejaDivision of Gastroenterology and Hepatology, Department of Medicine, University of Illinois at Chicago, Chicago, Illinois, USA.
Dawn M E BowdishDepartment of Pathology and Molecular Medicine, McMaster University, Hamilton, Ontario, Canada.
Michael G SuretteFarncombe Family Digestive Health Research Institute, McMaster University, Hamilton, Ontario, Canada.
Elena F VerduFarncombe Family Digestive Health Research Institute, McMaster University, Hamilton, Ontario, Canada. verdue@mcmaster.ca.
McMaster University · CAPopulation Health Research Institute · CAUniversity of Illinois Chicago · US

Funding

Intestinal Anion Transporters: Function and RegulationR01DK054016 · NIDDK · UNIVERSITY OF ILLINOIS AT CHICAGO · PI DUDEJA, PRADEEP K · 1998 to 2022
$7.0M
Transporter Trafficking Mechanisms in Infectious DiarrheaR01DK092441 · NIDDK · UNIVERSITY OF ILLINOIS AT CHICAGO · PI DUDEJA, PRADEEP K · 2011 to 2020
$3.0M
NIDDK NIH HHS R01 DK054016NIDDK NIH HHS R01 DK092441
6 · The paper itself

Abstract

The intestinal barrier encompasses structural, permeability and immune aspects of the gut mucosa that, when disrupted, may contribute to chronic inflammation. Although gnotobiotic studies have demonstrated the effects of microbiota on mucosal and systemic immunity, as well as intestinal barrier architecture and innate immune characteristics, its impact on barrier function remains unclear. We compared germ-free and conventional mice, as well as mice colonized with human fecal microbiota that were followed for 21 days post-colonization. Colonic barrier structure was investigated by immunohistochemistry, molecular and electron microscopy techniques. Permeability was assessed in colon tissue by Ussing chambers, and by serum LPS and MDP detection using TLR4- and NOD2-NFκB reporter assays. Microbiota profile was determined by Illumina 16S rRNA gene sequencing. Low dose dextran sodium sulfate was administered to assess microbiota-induced barrier changes on resistance to colonic injury. Permeability to paracellular probes and mucus layer structure resembled that of conventional mice by day 7 post-colonization, coinciding with reduced claudin-1 expression and transient IL-18 production by intestinal epithelial cells. These post-colonization adaptations were associated with decreased systemic bacterial antigen exposure and reduced susceptibility to intestinal injury. In conclusion, commensal colonization promotes physiological barrier structural and functional adaptations that contribute to intestinal homeostasis.

Indexed as

AnimalsColonDextran SulfateFecesFemaleGastrointestinal MicrobiomeGerm-Free LifeHomeostasisHumansInflammationIntestinal MucosaIntestinesMaleMiceMice, Inbred C57BLMicrobiotaDextran SulfateRNA, Ribosomal, 16S

Identifiers

PMID30242285
PMCPMC6155058
OpenAlexW2890995777

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.