Evidence map›Paper›PMID 30242271›Full record

ArticleNature communications2018

Hierarchical and stage-specific regulation of murine cardiomyocyte maturation by serum response factor.

Yuxuan Guo, Blake D Jardin, Pingzhu Zhou, Isha Sethi, Brynn N Akerberg, Christopher N Toepfer, Yulan Ai, Yifei Li, Qing Ma, Silvia Guatimosim and 9 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 94 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. A transcriptional enhancer regulates cardiac maturation.Nature cardiovascular research · 2024
    Article
  18. Article
  19. Review
  20. SRF transcriptionally regulates the oligodendrocyte cytoskeleton during CNS myelination.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 8 institutions in 4 countries.

Yuxuan GuoDepartment of Cardiology, Boston Children's Hospital, 300 Longwood Avenue, Boston, MA, 02115, USA.ORCID http://orcid.org/0000-0002-6009-4403
Blake D JardinDepartment of Cardiology, Boston Children's Hospital, 300 Longwood Avenue, Boston, MA, 02115, USA.ORCID http://orcid.org/0000-0002-1376-5235
Pingzhu ZhouDepartment of Cardiology, Boston Children's Hospital, 300 Longwood Avenue, Boston, MA, 02115, USA.
Isha SethiDepartment of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, 450 Brookline Avenue, Boston, MA, 02215, USA.
Brynn N AkerbergDepartment of Cardiology, Boston Children's Hospital, 300 Longwood Avenue, Boston, MA, 02115, USA.
Christopher N ToepferDepartment of Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, Boston, MA, 02115, USA.ORCID http://orcid.org/0000-0003-4671-2030
Yulan AiDepartment of Cardiology, Boston Children's Hospital, 300 Longwood Avenue, Boston, MA, 02115, USA.
Yifei LiDepartment of Cardiology, Boston Children's Hospital, 300 Longwood Avenue, Boston, MA, 02115, USA.ORCID http://orcid.org/0000-0002-3096-4287
Qing MaDepartment of Cardiology, Boston Children's Hospital, 300 Longwood Avenue, Boston, MA, 02115, USA.
Silvia GuatimosimDepartment of Physiology and Biophysics, Institute of Biological Sciences, Universidade Federal de Minas Gerais, Av. Antônio Carlos 6627, Belo Horizonte, MG, CEP: 31270-901, Brazil.
Yongwu HuDepartment of Cardiology, Boston Children's Hospital, 300 Longwood Avenue, Boston, MA, 02115, USA.
Grigor VaruzhanyanDivision of Biology and Biological Engineering, California Institute of Technology, 1200 East California Boulevard, MC 114-96, Pasadena, CA, 91125, USA.ORCID http://orcid.org/0000-0001-6165-0857
Nathan J VanDusenDepartment of Cardiology, Boston Children's Hospital, 300 Longwood Avenue, Boston, MA, 02115, USA.
Donghui ZhangDepartment of Cardiology, Boston Children's Hospital, 300 Longwood Avenue, Boston, MA, 02115, USA.
David C ChanDivision of Biology and Biological Engineering, California Institute of Technology, 1200 East California Boulevard, MC 114-96, Pasadena, CA, 91125, USA.
Guo-Cheng YuanDepartment of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, 450 Brookline Avenue, Boston, MA, 02215, USA.ORCID http://orcid.org/0000-0002-2283-4714
Christine E SeidmanDepartment of Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, Boston, MA, 02115, USA.ORCID http://orcid.org/0000-0001-6380-1209
Jonathan G SeidmanDepartment of Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, Boston, MA, 02115, USA.
William T PuDepartment of Cardiology, Boston Children's Hospital, 300 Longwood Avenue, Boston, MA, 02115, USA. wpu@pulab.org.ORCID http://orcid.org/0000-0002-4551-8079
Boston Children's Hospital · USCalifornia Institute of Technology · USDana-Farber Cancer Institute · USBoston University · USBrigham and Women's Hospital · USCentre for Human Genetics · GBHarvard University · USUniversidade Federal de Minas Gerais · BR

Funding

Administrative Coordinating Center: Cardiovascular Development and Pediatric Cardiac Genomics ConsortiaU01HL131003 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI CNOTA, JAMES, OLLBERDING, NICHOLAS J · 2016 to 2024
$54.8M
RESEARCH METHODS IN PEDIATRICS HEART DISEASET32HL007572 · NHLBI · CHILDREN'S HOSPITAL BOSTON · PI Sarah D DE FERRANTI, Jane W. Newburger · 1985 to 2026
$13.0M
Regulation of Cardiac Development in Health and DiseaseUM1HL098166 · NHLBI · HARVARD MEDICAL SCHOOL · PI PENNACCHIO, LEN ALEXANDER, PU, WILLIAM TSWENCHING · 2015 to 2019
$4.4M
Regulation of Cardiomyocyte MaturationR01HL146634 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI PU, WILLIAM TSWENCHING · 2019 to 2022
$2.4M
NHLBI NIH HHS R01 HL146634NHLBI NIH HHS U01 HL131003NHLBI NIH HHS UM1 HL098166Wellcome Trust 206466/Z/17/Z
6 · The paper itself

Abstract

After birth, cardiomyocytes (CM) acquire numerous adaptations in order to efficiently pump blood throughout an animal's lifespan. How this maturation process is regulated and coordinated is poorly understood. Here, we perform a CRISPR/Cas9 screen in mice and identify serum response factor (SRF) as a key regulator of CM maturation. Mosaic SRF depletion in neonatal CMs disrupts many aspects of their maturation, including sarcomere expansion, mitochondrial biogenesis, transverse-tubule formation, and cellular hypertrophy. Maintenance of maturity in adult CMs is less dependent on SRF. This stage-specific activity is associated with developmentally regulated SRF chromatin occupancy and transcriptional regulation. SRF directly activates genes that regulate sarcomere assembly and mitochondrial dynamics. Perturbation of sarcomere assembly but not mitochondrial dynamics recapitulates SRF knockout phenotypes. SRF overexpression also perturbs CM maturation. Together, these data indicate that carefully balanced SRF activity is essential to promote CM maturation through a hierarchy of cellular processes orchestrated by sarcomere assembly.

Indexed as

AnimalsAnimals, NewbornChromatinCRISPR-Cas SystemsFemaleGene Expression RegulationMaleMiceMice, KnockoutMutagenesisMyocytes, CardiacSerum Response FactorTranscriptomeChromatinSerum Response Factor

Identifiers

PMID30242271
PMCPMC6155060
OpenAlexW2889940320

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.