Evidence map›Paper›PMID 30242122›Full record

ReviewThe Journal of biological chemistry2019

High-resolution studies of lysis-lysogeny decision-making in bacteriophage lambda.

Qiuyan Shao, Jimmy T Trinh, Lanying Zeng

Abstract readReview
In one paragraph

Review in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Review
  2. Revisiting the life cycle of temperate phages.Nature reviews. Microbiology · 2026
    Review
  3. Counting to two: how phages decide between lysis and lysogeny.bioRxiv : the preprint server for biology · 2026
    Article
  4. Discovery and characterization of a novelPHAGE (New Rochelle, N.Y.) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Prophage-Derived Regions inInternational journal of molecular sciences · 2023
    Article
  15. Article
  16. Control of λ LysogenicACS synthetic biology · 2022
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Qiuyan ShaoFrom the Department of Biochemistry and Biophysics and.
Jimmy T TrinhFrom the Department of Biochemistry and Biophysics and.
Lanying ZengFrom the Department of Biochemistry and Biophysics and lzeng@tamu.edu.

Funding

Integration of Diverse Inputs Determines Developmental OutcomesR01GM107597 · NIGMS · TEXAS A&M AGRILIFE RESEARCH · PI BALAZSI, GABOR, ZENG, LANYING · 2015 to 2018
$1.7M
NIGMS NIH HHS R01 GM107597
6 · The paper itself

Abstract

Cellular decision-making guides complex development such as cell differentiation and disease progression. Much of our knowledge about decision-making is derived from simple models, such as bacteriophage lambda infection, in which lambda chooses between the vegetative lytic fate and the dormant lysogenic fate. This paradigmatic system is broadly understood but lacking mechanistic details, partly due to limited resolution of past studies. Here, we discuss how modern technologies have enabled high-resolution examination of lambda decision-making to provide new insights and exciting possibilities in studying this classical system. The advent of techniques for labeling specific DNA, RNA, and proteins in cells allows for molecular-level characterization of events in lambda development. These capabilities yield both new answers and new questions regarding how the isolated lambda genetic circuit acts, what biological events transpire among phages in their natural context, and how the synergy of simple phage macromolecules brings about complex behaviors.

Indexed as

Bacteriophage lambdaDNA, ViralLysogenyRNA, ViralDNA, ViralRNA, Viralbacteriophagebacteriophage lambdabiophysicscellular decision-makinggene regulationgene regulatory networkhigh-resolution imaginglysis-lysogenymicrobiologymicroscopic imagingphage DNA replicationphage interactionphage votingstochasticity

Identifiers

PMID30242122
PMCPMC6416446

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.