Evidence map›Paper›PMID 30241465›Full record

ArticleBMC genetics2018

Linkage analysis and QTL mapping in a tetraploid russet mapping population of potato.

Alicia N Massa, Norma C Manrique-Carpintero, Joseph Coombs, Kathleen G Haynes, Paul C Bethke, Tina L Brandt, Sanjay K Gupta, G Craig Yencho, Richard G Novy, David S Douches

Open access · diamondAbstract read
In one paragraph

Article in BMC genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
6.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 40 citations in OpenAlex.

  1. Resolving a century-old enigma: potato 'Bolters' originate from instability of the StCDF1.3 allele.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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  13. Insight into theInternational journal of molecular sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Alicia N MassaUSDA, Agricultural Research Service, National Peanut Research Laboratory, 1011 Forrester DR., SE, Dawson, GA, 39842, USA. Alicia.Massa@ars.usda.gov.ORCID 0000-0001-8361-9850
Norma C Manrique-CarpinteroPlant, Soil and Microbial Sciences Department, Michigan State University, 1066 Bogue St, East Lansing, MI, 48824, USA.
Joseph CoombsPlant, Soil and Microbial Sciences Department, Michigan State University, 1066 Bogue St, East Lansing, MI, 48824, USA.
Kathleen G HaynesUSDA, Agricultural Research Service, 10300 Baltimore Ave, Beltsville, MD, 20705-1249, USA.
Paul C BethkeUSDA, Agricultural Research Service, Vegetable Crops Research Unit, 1575 Linden Drive, Madison, WI, 53706, USA.
Tina L BrandtJ.R. Simplot Company, Boise, ID, 83707, USA.
Sanjay K GuptaDepartment of Soil, Water, and Climate, 1991 Upper Buford Circle, Saint Paul, MN, 55108, USA.
G Craig YenchoDepartment of Horticulture, North Carolina State University, 214 Kilgore Hall, Raleigh, NC, 27695, USA.
Richard G NovyUSDA Agricultural Research Service, Small Grains and Potato Germplasm Research Unit, 1693 S 2700 W, Aberdeen, ID, 83210, USA.
David S DouchesPlant, Soil and Microbial Sciences Department, Michigan State University, 1066 Bogue St, East Lansing, MI, 48824, USA. douchesd@msu.edu.
Agricultural Research Service · USMichigan State University · USNorth Carolina State University · USSimplot (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGenome-wide single nucleotide polymorphism (SNP) markers coupled with allele dosage information has emerged as a powerful tool for studying complex traits in cultivated autotetraploid potato (Solanum tuberosum L., 2n = 4× = 48). To date, this approach has been effectively applied to the identification of quantitative trait loci (QTLs) underlying highly heritable traits such as disease resistance, but largely unexplored for traits with complex patterns of inheritance.

resultsIn this study, an F

conclusionsLinkage analysis and QTL mapping in a russet mapping population (A05141) using SNP dosage information successfully identified favorable alleles and candidate SNPs for resistance to the accumulation of tuber reducing sugars. These novel markers have a high potential for the improvement of tuber processing quality. Moreover, the discovery of different genetic models for traits with overlapping QTLs at the maturity locus clearly suggests an independent genetic control.

Indexed as

Polymorphism, Single NucleotideQuantitative Trait LociChromosome MappingGenetic LinkageGenome-Wide Association StudyPlant TubersSolanum tuberosumSugarsTetraploidySugarsPotatoQuantitative trait locusSingle nucleotide polymorphismSolanum tuberosumTuber processing qualityVine maturity

Identifiers

PMID30241465
PMCPMC6150958
OpenAlexW2890379783

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.