Evidence map›Paper›PMID 30240643›Full record

ArticleiScience2018

Chromosomal Translocation Formation Is Sufficient to Produce Fusion Circular RNAs Specific to Patient Tumor Cells.

Loelia Babin, Marion Piganeau, Benjamin Renouf, Khadija Lamribet, Cecile Thirant, Ludovic Deriano, Thomas Mercher, Carine Giovannangeli, Erika C Brunet

Open access · goldAbstract read
In one paragraph

Article in iScience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Preleukemic Fusion Genes Induced via Ionizing Radiation.International journal of molecular sciences · 2023
    Review
  5. Article
  6. Review
  7. Review
  8. Review
  9. Circular RNAs in Blood Malignancies.Frontiers in molecular biosciences · 2020
    Review
  10. Article
  11. Review
  12. Non-Coding RNA Networks in ALK-Positive Anaplastic-Large Cell Lymphoma.International journal of molecular sciences · 2019
    Review
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 1 country.

Loelia BabinLaboratory "Genome Dynamics in the Immune System", Equipe Labellisée Ligue Contre le Cancer, INSERM UMR1163; Université Paris Descartes Sorbonne Paris Cité, Institut Imagine, Paris 75015, France; Museum National d'Histoire Naturelle, INSERM U1154, CNRS UMR7196, Sorbonne Université, Paris 75005, France.
Marion PiganeauMuseum National d'Histoire Naturelle, INSERM U1154, CNRS UMR7196, Sorbonne Université, Paris 75005, France.
Benjamin RenoufMuseum National d'Histoire Naturelle, INSERM U1154, CNRS UMR7196, Sorbonne Université, Paris 75005, France.
Khadija LamribetMuseum National d'Histoire Naturelle, INSERM U1154, CNRS UMR7196, Sorbonne Université, Paris 75005, France.
Cecile ThirantINSERM U1170, Equipe Labellisée Ligue Contre le Cancer, Gustave Roussy Institute, Université Paris Diderot, Université Paris-Sud, Villejuif 94800, Francet.
Ludovic DerianoGenome Integrity, Immunity and Cancer Unit, Department of Immunology, Department of Genomes and Genetics, Institut Pasteur, Paris 75015, France.
Thomas MercherINSERM U1170, Equipe Labellisée Ligue Contre le Cancer, Gustave Roussy Institute, Université Paris Diderot, Université Paris-Sud, Villejuif 94800, Francet.
Carine GiovannangeliMuseum National d'Histoire Naturelle, INSERM U1154, CNRS UMR7196, Sorbonne Université, Paris 75005, France.
Erika C BrunetLaboratory "Genome Dynamics in the Immune System", Equipe Labellisée Ligue Contre le Cancer, INSERM UMR1163; Université Paris Descartes Sorbonne Paris Cité, Institut Imagine, Paris 75015, France; Museum National d'Histoire Naturelle, INSERM U1154, CNRS UMR7196, Sorbonne Université, Paris 75005, France. Electronic address: erika.brunet@inserm.fr.
Centre National de la Recherche Scientifique · FRMuséum national d'Histoire naturelle · FRDepartment of Genomes & Genetics · FRInstitut Gustave Roussy · FRSorbonne Université · FRUniversité Paris Cité · FRUniversité Paris-Sud · FR

Funding

European Research Council 310917
6 · The paper itself

Abstract

Circular RNAs constitute a unique class of RNAs whose precise functions remain to be elucidated. In particular, cancer-associated chromosomal translocations can give rise to fusion circular RNAs that play a role in leukemia progression. However, how and when fusion circular RNAs are formed and whether they are being selected in cancer cells remains unknown. Here, we used CRISPR/Cas9 to generate physiological translocation models of NPM1-ALK fusion gene. We showed that, in addition to generating fusion proteins and activating specific oncogenic pathways, chromosomal translocation induced by CRISPR/Cas9 led to the formation of de novo fusion circular RNAs. Specifically, we could recover different classes of circular RNAs composed of different circularization junctions, mainly back-spliced species. In addition, we identified fusion circular RNAs identical to those found in related patient tumor cells providing evidence that fusion circular RNAs arise early after chromosomal formation and are not just a consequence of the oncogenesis process.

Indexed as

CancerMolecular BiologyMolecular Genetics

Identifiers

PMID30240643
PMCPMC6123901
OpenAlexW2809057482

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.