ArticleDatabase : the journal of biological databases and curation2018
PalmXplore: oil palm gene database.
Article in Database : the journal of biological databases and curation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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Who cites it
11 citing papers in PubMed.
- Unveiling the Secrets of Oil Palm Genetics: A Look into Omics Research.International journal of molecular sciences · 2024Review
- Genome-Wide Identification and Comprehensive Analysis of theInternational journal of molecular sciences · 2023Article
- High-resolution genetic linkage map and height-related QTLs in an oil palm (Physiology and molecular biology of plants : an international journal of functional plant biology · 2023Article
- EgSPEECHLESS Responses to Salt Stress by Regulating Stomatal Development in Oil Palm.International journal of molecular sciences · 2022Article
- Identification and expression analysis of histone modification gene (HM) family during somatic embryogenesis of oil palm.BMC genomics · 2022Article
- Analysis of genetic diversity and discrimination of Oil Palm DxP populations based on the origins of pisifera elite parents.Breeding science · 2021Article
- Phenomics, genomics of oil palm (Physiology and molecular biology of plants : an international journal of functional plant biology · 2021Review
- Genes, pathways and networks responding to drought stress in oil palm roots.Scientific reports · 2020Article
- DNA methylation changes in clonally propagated oil palm.Plant cell reports · 2020Article
- Seed Germination in Oil Palm (International journal of molecular sciences · 2020Review
- Article
Corrections and comments
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Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A set of Elaeis guineensis genes had been generated by combining two gene prediction pipelines: Fgenesh++ developed by Softberry and Seqping by the Malaysian Palm Oil Board. PalmXplore was developed to provide a scalable data repository and a user-friendly search engine system to efficiently store, manage and retrieve the oil palm gene sequences and annotations. Information deposited in PalmXplore includes predicted genes, their genomic coordinates, as well as the annotations derived from external databases, such as Pfam, Gene Ontology and Kyoto Encyclopedia of Genes and Genomes. Information about genes related to important traits, such as those involved in fatty acid biosynthesis (FAB) and disease resistance, is also provided. The system offers Basic Local Alignment Search Tool homology search, where the results can be downloaded or visualized in the oil palm genome browser (MYPalmViewer). PalmXplore is regularly updated offering new features, improvements to genome annotation and new genomic sequences. The system is freely accessible at http://palmxplore.mpob.gov.my.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.