Evidence map›Paper›PMID 30238770›Full record

ArticleFuture microbiology2018

Genetic and population analyses of Vibrio parahaemolyticus isolates from three major coastal regions in China.

Ping Li, Wenwen Xin, Lin Kang, Zhongwen Chen, Chenyi Guo, Shan Gao, Hao Yang, Bin Ji, Yong Yan, Henghui Wang and 3 more

Abstract read
In one paragraph

Article in Future microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Genetic Diversity and Population Structure ofFrontiers in microbiology · 2021
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Ping LiJiaxing Key Laboratory of Pathogenic Microbiology, Jiaxing Center for Disease Control & Prevention, Jiaxing 314050, PR China.
Wenwen XinState Key Laboratory of Pathogen & Biosecurity, Beijing Institute of Microbiology & Epidemiology, Beijing 100071, PR China.
Lin KangState Key Laboratory of Pathogen & Biosecurity, Beijing Institute of Microbiology & Epidemiology, Beijing 100071, PR China.
Zhongwen ChenJiaxing Key Laboratory of Pathogenic Microbiology, Jiaxing Center for Disease Control & Prevention, Jiaxing 314050, PR China.
Chenyi GuoState Key Laboratory of Pathogen & Biosecurity, Beijing Institute of Microbiology & Epidemiology, Beijing 100071, PR China.
Shan GaoState Key Laboratory of Pathogen & Biosecurity, Beijing Institute of Microbiology & Epidemiology, Beijing 100071, PR China.
Hao YangState Key Laboratory of Pathogen & Biosecurity, Beijing Institute of Microbiology & Epidemiology, Beijing 100071, PR China.
Bin JiState Key Laboratory of Pathogen & Biosecurity, Beijing Institute of Microbiology & Epidemiology, Beijing 100071, PR China.
Yong YanJiaxing Key Laboratory of Pathogenic Microbiology, Jiaxing Center for Disease Control & Prevention, Jiaxing 314050, PR China.
Henghui WangJiaxing Key Laboratory of Pathogenic Microbiology, Jiaxing Center for Disease Control & Prevention, Jiaxing 314050, PR China.
Dongsheng ZhouState Key Laboratory of Pathogen & Biosecurity, Beijing Institute of Microbiology & Epidemiology, Beijing 100071, PR China.
Wenhui YangState Key Laboratory of Pathogen & Biosecurity, Beijing Institute of Microbiology & Epidemiology, Beijing 100071, PR China.
Jinglin WangGraduate College, Anhui Medical University, Hefei 230032, PR China.

Funding

Mechanisms and consequences of CNS aneuploidies altered by fetal ethanol exposureR01AA021402 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI CHUN, JEROLD · 2013 to 2017
$1.9M
NIAAA NIH HHS R01 AA021402
6 · The paper itself

Abstract

aimThis study aims to evaluate the genetic and population structure of Vibrio parahaemolyticus in the major coastal regions of China. MATERIALS &

methodsMultilocus sequence typing was performed.

resultsInsertion of large sequence into recA happened in nearly 30 strains, which were untypeable by multilocus sequence typing. A collection of 307 V. parahaemolyticus isolates were typed into 160 sequence types, including 117 novel ones. eBURST analysis revealed five clonal complexes, 11 doublets, and 108 singletons. The 160 sequence types formed two main lineages in the phylogenetic analysis.

conclusionV. parahaemolyticus along the Chinese coastal regions exhibits high levels of genetic diversity and has undergone significant purifying selection and frequent recombination. A deeper understanding of V. parahaemolyticus genetic diversity could be obtained at the level of genome sequences.

Indexed as

Genetic VariationAllelesBacterial ProteinsChinaDNA, BacterialGenotypeHumansMultilocus Sequence TypingPhylogenyRec A RecombinasesSeafoodSeawaterSequence Analysis, DNAVibrio parahaemolyticusBacterial ProteinsDNA, BacterialRec A RecombinasesChinagenetic diversityMLSTpopulation structureVibrio parahaemolyticus

Identifiers

PMID30238770
PMCPMC6190215

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.