Evidence map›Paper›PMID 30237460›Full record

ArticleScientific reports2018

A quantitative analysis of 3D-cell distribution in regenerating muscle-skeletal system with synchrotron X-ray computed microtomography.

Markéta Tesařová, Lucia Mancini, Andras Simon, Igor Adameyko, Markéta Kaucká, Ahmed Elewa, Gabriele Lanzafame, Yi Zhang, Dominika Kalasová, Bára Szarowská and 3 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 5 countries.

Markéta TesařováCentral European Institute of Technology, Brno University of Technology, Brno, Czech Republic.
Lucia ManciniElettra-Sincrotrone Trieste S.C.p.A., Basovizza, Trieste, Italy.
Andras SimonDepartment of Cellular and Molecular Biology, Karolinska Institutet, Solna, 171777, Stockholm, Sweden.
Igor AdameykoDepartment of Physiology and Pharmacology, Karolinska Institutet, Solna, 171777, Stockholm, Sweden.
Markéta KauckáDepartment of Physiology and Pharmacology, Karolinska Institutet, Solna, 171777, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-8781-9769
Ahmed ElewaDepartment of Cellular and Molecular Biology, Karolinska Institutet, Solna, 171777, Stockholm, Sweden.
Gabriele LanzafameElettra-Sincrotrone Trieste S.C.p.A., Basovizza, Trieste, Italy.ORCID http://orcid.org/0000-0001-5352-9918
Yi ZhangDepartment of Physiology and Pharmacology, Karolinska Institutet, Solna, 171777, Stockholm, Sweden.
Dominika KalasováCentral European Institute of Technology, Brno University of Technology, Brno, Czech Republic.
Bára SzarowskáDepartment of Physiology and Pharmacology, Karolinska Institutet, Solna, 171777, Stockholm, Sweden.
Tomáš ZikmundCentral European Institute of Technology, Brno University of Technology, Brno, Czech Republic.
Marie NovotnáCentral European Institute of Technology, Brno University of Technology, Brno, Czech Republic.
Jozef KaiserCentral European Institute of Technology, Brno University of Technology, Brno, Czech Republic. kaiser@fme.vutbr.cz.ORCID http://orcid.org/0000-0002-7397-125X
Central European Institute of Technology · CZKarolinska Institutet · SEElettra-Sincrotrone Trieste S.C.p.A. · ITCentral South University · CN

Funding

Ministerstvo Školství, Mládeže a Tělovýchovy (Ministry of Education, Youth and Sports) LQ1601Ministerstvo Školství, Mládeže a Tělovýchovy (Ministry of Education, Youth and Sports) MEYS CR, 2016-2019Vysoké Učení Technické v Brně (Brno University of Technology) FSI-S-17-4506
6 · The paper itself

Abstract

One of the greatest enigmas of modern biology is how the geometry of muscular and skeletal structures are created and how their development is controlled during growth and regeneration. Scaling and shaping of vertebrate muscles and skeletal elements has always been enigmatic and required an advanced technical level in order to analyse the cell distribution in 3D. In this work, synchrotron X-ray computed microtomography (µCT) and chemical contrasting has been exploited for a quantitative analysis of the 3D-cell distribution in tissues of a developing salamander (Pleurodeles waltl) limb - a key model organism for vertebrate regeneration studies. We mapped the limb muscles, their size and shape as well as the number and density of cells within the extracellular matrix of the developing cartilage. By using tomographic approach, we explored the polarity of the cells in 3D, in relation to the structure of developing joints. We found that the polarity of chondrocytes correlates with the planes in joint surfaces and also changes along the length of the cartilaginous elements. Our approach generates data for the precise computer simulations of muscle-skeletal regeneration using cell dynamics models, which is necessary for the understanding how anisotropic growth results in the precise shapes of skeletal structures.

Indexed as

SynchrotronsAnimalsCaudataMuscle DevelopmentMuscle, SkeletalRegenerationX-Ray Microtomography

Identifiers

PMID30237460
PMCPMC6148031
OpenAlexW2892158413

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.