Evidence map›Paper›PMID 30237313›Full record

ArticleThe EMBO journal2018

Conformational dynamics of the ABC transporter McjD seen by single-molecule FRET.

Florence Husada, Kiran Bountra, Konstantinos Tassis, Marijn de Boer, Maria Romano, Sylvie Rebuffat, Konstantinos Beis, Thorben Cordes

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
4.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 75 citations in OpenAlex.

  1. Review
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  10. The Immunoprotection ofVeterinary sciences · 2023
    Article
  11. Article
  12. Article
  13. Structural dynamics in the evolution of a bilobed protein scaffold.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  14. Single-Molecule FRET of Membrane Transport Proteins.Chembiochem : a European journal of chemical biology · 2021
    Review
  15. Molecular and Spectroscopic Characterization of Green and Red Cyanine Fluorophores from the Alexa Fluor and AF Series*.Chemphyschem : a European journal of chemical physics and physical chemistry · 2021
    Article
  16. Review
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 4 countries.

Florence HusadaMolecular Microscopy Research Group, Zernike Institute for Advanced Materials, University of Groningen, Groningen, The Netherlands.
Kiran BountraDepartment of Life Sciences, Imperial College London, London, UK.
Konstantinos TassisMolecular Microscopy Research Group, Zernike Institute for Advanced Materials, University of Groningen, Groningen, The Netherlands.
Marijn de BoerMolecular Microscopy Research Group, Zernike Institute for Advanced Materials, University of Groningen, Groningen, The Netherlands.
Maria RomanoDepartment of Life Sciences, Imperial College London, London, UK.
Sylvie RebuffatCommunication Molecules and Adaptation of Microorganisms Laboratory, (MCAM, UMR 7245 CNRS-MNHN), Muséum National d'Histoire Naturelle, Centre National de la Recherche Scientifique, Sorbonne Universités, Paris, France.
Konstantinos BeisDepartment of Life Sciences, Imperial College London, London, UK kbeis@imperial.ac.uk cordes@bio.lmu.de.ORCID 0000-0001-5727-4721
Thorben CordesMolecular Microscopy Research Group, Zernike Institute for Advanced Materials, University of Groningen, Groningen, The Netherlands kbeis@imperial.ac.uk cordes@bio.lmu.de.ORCID 0000-0002-8598-5499
University of Groningen · NLRutherford Appleton Laboratory · GBCentre National de la Recherche Scientifique · FR

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

ABC transporters utilize ATP for export processes to provide cellular resistance against toxins, antibiotics, and harmful metabolites in eukaryotes and prokaryotes. Based on static structure snapshots, it is believed that they use an alternating access mechanism, which couples conformational changes to ATP binding (outward-open conformation) and hydrolysis (inward-open) for unidirectional transport driven by ATP Here, we analyzed the conformational states and dynamics of the antibacterial peptide exporter McjD from

Indexed as

Fluorescence Resonance Energy TransferMolecular Dynamics SimulationAdenosine TriphosphateATP-Binding Cassette TransportersEscherichia coliEscherichia coli ProteinsProtein DomainsAdenosine TriphosphateATP-Binding Cassette TransportersEscherichia coli ProteinsMcjD protein, E coliABC transporterconformational dynamicsFRETsingle‐molecule studies

Identifiers

PMID30237313
PMCPMC6213277
OpenAlexW2891495202

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.