Evidence map›Paper›PMID 30237200›Full record

ArticleMolecular & cellular proteomics : MCP2019

Targeted Analysis of Lysosomal Directed Proteins and Their Sites of Mannose-6-phosphate Modification.

Tomislav Čaval, Jing Zhu, Weihua Tian, Sanne Remmelzwaal, Zhang Yang, Henrik Clausen, Albert J R Heck

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 51 citations in OpenAlex.

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  15. ESCPE-1 mediates retrograde endosomal sorting of the SARS-CoV-2 host factor Neuropilin-1.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Article
  17. The Hitchhiker's guide to glycoproteomics.Biochemical Society transactions · 2021
    Review
  18. Article
  19. Towards structure-focused glycoproteomics.Biochemical Society transactions · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Tomislav ČavalFrom the ‡Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Science4Life, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands;; §Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands.
Jing ZhuFrom the ‡Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Science4Life, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands;; §Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands.
Weihua Tian¶Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, University of Copenhagen, Faculty of Health Sciences, Nørre Alle 20, DK-2200 Copenhagen N, Denmark.
Sanne RemmelzwaalFrom the ‡Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Science4Life, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands;; §Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands.
Zhang Yang¶Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, University of Copenhagen, Faculty of Health Sciences, Nørre Alle 20, DK-2200 Copenhagen N, Denmark.
Henrik Clausen¶Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, University of Copenhagen, Faculty of Health Sciences, Nørre Alle 20, DK-2200 Copenhagen N, Denmark.
Albert J R HeckFrom the ‡Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Science4Life, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands;; §Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands;. Electronic address: a.j.r.heck@uu.nl.
Utrecht University · NLUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mannose-6-phosphate (M6P) is a distinctive post-translational modification critical for trafficking of lysosomal acid hydrolases into the lysosome. Improper trafficking into the lysosome, and/or lack of certain hydrolases, results in a toxic accumulation of their substrates within the lysosomes. To gain insight into the enzymes destined to the lysosome these glycoproteins can be distinctively enriched and studied using their unique M6P tag. Here we demonstrate, by adapting a protocol optimized for the enrichment of phosphopeptides using Fe

Indexed as

Acid PhosphataseAnimalsBinding SitesCHO CellsChromatography, AffinityCricetulusGene Knockout TechniquesGenetic EngineeringGlycopeptidesHeLa CellsHumansIronLysosomesMannosephosphatesProtein Processing, Post-TranslationalProteomicsAcid PhosphataseACP2 protein, humanACP5 protein, humanGlycopeptidesIronmannose-6-phosphateMannosephosphatesTartrate-Resistant Acid PhosphataseCellular OrganellesGlycoprotein PathwaysGlycoproteinsGlycoproteomicsLysosomal DisordersLysosomeMannose-6-phosphateMannose-6-phosphate ReceptorsPhosphorylationTargeted Degradation

Identifiers

PMID30237200
PMCPMC6317476
OpenAlexW2891568018

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.