Evidence map›Paper›PMID 30236150›Full record

ArticleParasites & vectors2018

Genetic characterisation and phylogenetic status of whipworms (Trichuris spp.) from captive non-human primates in China, determined by nuclear and mitochondrial sequencing.

Yue Xie, Bo Zhao, Eric P Hoberg, Mei Li, Xuan Zhou, Xiaobin Gu, Weimin Lai, Xuerong Peng, Guangyou Yang

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Yue XieDepartment of Parasitology, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, China.
Bo ZhaoChengdu Zoo, Chengdu, 610081, Sichuan, China.
Eric P HobergDivision of Parasitology, Museum of Southwestern Biology, University of New Mexico, Albuquerque, NM, 87131, USA.
Mei LiDepartment of Parasitology, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, China.
Xuan ZhouInstitute of Animal Genetics and Breeding, College of Animal Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.
Xiaobin GuDepartment of Parasitology, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, China.
Weimin LaiDepartment of Parasitology, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, China.
Xuerong PengDepartment of Chemistry, College of Life and Basic Science, Sichuan Agricultural University, Chengdu, 611130, China.
Guangyou YangDepartment of Parasitology, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, 611130, China. guangyou1963@aliyun.com.
Sichuan Agricultural University · CNUniversity of New Mexico · US

Funding

High-level Scientific Research Foundation for the Introduction of Talents of Sichuan Agricultural University 03120322Program for Changjiang Scholars and Innovative Research Team in University (PCSIRT) IRT0848Research Fund for the Chengdu Research of Giant Panda Breeding CPF2012-13
6 · The paper itself

Abstract

backgroundWhipworms (Nematoda: Trichuridae), among the most common soil-transmitted helminths (STHs), can cause the socioeconomically important disease trichuriasis in various mammalian hosts including humans and non-human primates. For many years, Trichuris from non-human primates has been assigned to the same species as the one infecting humans Trichuris trichiura. More recently, several molecular reports challenged this assumption following recognition of a Trichuris species complex observed in humans and non-human primates. A refined concept for species limits within Trichuris contributes to an understanding of diversity and the potential (zoonotic) transmission among humans and non-human primates. In this study, we expanded previous investigations by exploring the diversity of Trichuris among eight primates including three Asian autochthonous species (i.e. Rhinopithecus roxellana, Rhinopithecus bieti and Nomascus leucogenys). Species-level identification, whether novel or assignable to known lineages of Trichuris, was based on analyses of nuclear internal transcribed spacers (ITS) and mitochondrial cytochrome c oxidase subunit 1 (cox1) genes.

resultsIn total, seven genetically distinct subgroups of whipworms were determined to be present among the primates sampled. Most Trichuris lineages, including Subgroups 1, 1', 3, 5 and 6, showed a broad host range and were not restricted to particular primate species; in addition to T. trichiura, a complex of Trichuris species was shown infecting primates. Furthermore, it was assumed that Trichuris spp. from either N. leucogenys and P. hamadryas or R. roxellana and R. bieti, respectively, were conspecific. Each pair was indicated to be a discrete lineage of Trichuris, designated, respectively, as Subgroups 1 or 1' and 2, based on integrated genetic and phylogenetic evidence.

conclusionThese results emphasise that the taxonomy and genetic variations of Trichuris are more complicated than previously acknowledged. These cumulative molecular and phylogenetic data provide a better understanding of the taxonomy, genetics and evolutionary biology of the whipworms.

Indexed as

Genetic VariationAnimalsBiological EvolutionCercopithecidaeChinaDNA, HelminthDNA, Ribosomal SpacerElectron Transport Complex IVFemaleHost SpecificityHylobatesMalePhylogenyPrimatesSequence Analysis, DNATrichuriasisDNA, HelminthDNA, Ribosomal SpacerElectron Transport Complex IVGenetic analysisMitochondrial cox1Nuclear ITSPhylogenyPrimatesTrichurisWhipworms

Identifiers

PMID30236150
PMCPMC6149069
OpenAlexW2891966206

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.