Evidence map›Paper›PMID 30235120›Full record

ArticleIEEE transactions on medical imaging2019

A Sparse Non-Negative Matrix Factorization Framework for Identifying Functional Units of Tongue Behavior From MRI.

Jonghye Woo, Jerry L Prince, Maureen Stone, Fangxu Xing, Arnold D Gomez, Jordan R Green, Christopher J Hartnick, Thomas J Brady, Timothy G Reese, Van J Wedeen and 1 more

Abstract read
In one paragraph

Article in IEEE transactions on medical imaging, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Speech Audio Synthesis from Tagged MRI and Non-Negative Matrix Factorization via Plastic Transformer.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jonghye Woo
Jerry L Prince
Maureen Stone
Fangxu Xing
Arnold D Gomez
Jordan R Green
Christopher J Hartnick
Thomas J Brady
Timothy G Reese
Van J Wedeen
Georges El Fakhri

Funding

Unified Joint Statistical Reconstruction of PET & MRP41EB022544 · NIBIB · YALE UNIVERSITY · PI Kira Grogg · 2017 to 2026
$14.8M
PET/MR Mapping of Myocardial Membrane PotentialR01HL137230 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI EL FAKHRI, GEORGES · 2017 to 2020
$3.3M
Predictors of Speech Quality after Tongue Cancer SurgeryR01CA133015 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI STONE, MAUREEN · 2009 to 2013
$2.5M
Tongue muscle function after cancer surgery using 4D MRI, DTI, and MR taggingR01DC014717 · NIDCD · JOHNS HOPKINS UNIVERSITY · PI PRINCE, JERRY L · 2015 to 2019
$1.7M
4D Statistical Atlas from Multimodal Tongue MR ImagesR00DC012575 · NIDCD · MASSACHUSETTS GENERAL HOSPITAL · PI WOO, JONGHYE · 2015 to 2017
$746k
In Vivo Mapping of Uncharted Functional Units of Tongue Motion During SpeechR21DC016047 · NIDCD · MASSACHUSETTS GENERAL HOSPITAL · PI WOO, JONGHYE · 2018 to 2019
$460k
NCI NIH HHS R01 CA133015NHLBI NIH HHS R01 HL137230NIBIB NIH HHS P41 EB022544NIDCD NIH HHS R00 DC012575NIDCD NIH HHS R01 DC014717NIDCD NIH HHS R21 DC016047
6 · The paper itself

Abstract

Muscle coordination patterns of lingual behaviors are synergies generated by deforming local muscle groups in a variety of ways. Functional units are functional muscle groups of local structural elements within the tongue that compress, expand, and move in a cohesive and consistent manner. Identifying the functional units using tagged-magnetic resonance imaging (MRI) sheds light on the mechanisms of normal and pathological muscle coordination patterns, yielding improvement in surgical planning, treatment, or rehabilitation procedures. In this paper, to mine this information, we propose a matrix factorization and probabilistic graphical model framework to produce building blocks and their associated weighting map using motion quantities extracted from tagged-MRI. Our tagged-MRI imaging and accurate voxel-level tracking provide previously unavailable internal tongue motion patterns, thus revealing the inner workings of the tongue during speech or other lingual behaviors. We then employ spectral clustering on the weighting map to identify the cohesive regions defined by the tongue motion that may involve multiple or undocumented regions. To evaluate our method, we perform a series of experiments. We first use two-dimensional images and synthetic data to demonstrate the accuracy of our method. We then use three-dimensional synthetic and in vivo tongue motion data using protrusion and simple speech tasks to identify subject-specific and data-driven functional units of the tongue in localized regions.

Indexed as

AlgorithmsCluster AnalysisHumansMagnetic Resonance ImagingSpeechTongue

Identifiers

PMID30235120
PMCPMC6422735

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.